Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M04
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 84 7e-16
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 84 7e-16
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 84 7e-16
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 84 7e-16
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 84 7e-16
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 84 7e-16
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 84 7e-16
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 83 1e-15
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 82 2e-15
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEENPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 83.8 bits (198), Expect = 7e-16
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 83.0 bits (196), Expect = 1e-15
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 108 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 167
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD-GGTXGXG*EEAAI 690
E T+EL YN+ L +G+ N+A+ +L+ AE C S+ +D GT E AI
Sbjct: 168 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQEAEDLCRRSLSEDTDGTEEDPQAELAI 227
Query: 691 I 693
I
Sbjct: 228 I 228
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ + D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 21 YGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 79
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 80 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 116
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 82.2 bits (194), Expect = 2e-15
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 337 TPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXP-TSE 513
T LKEL Q+LYRLE+Y +C +YRDL++N+ D+Y++ERK E
Sbjct: 114 TDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPE 173
Query: 514 LPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDD 651
E T+EL YN+ L +G+ N+A+ +L++AE C S+ +D
Sbjct: 174 NLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSED 219
Score = 78.2 bits (184), Expect = 3e-14
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 FARADDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD- 251
+ R D+ RALK KILQI ++ A HCKVVC +Q +FKEAL + N LA +
Sbjct: 27 YGRNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNS 85
Query: 252 LLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKG 362
L FEKAY +YRL+ + AL+T++SA + K + G
Sbjct: 86 LSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYG 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,400,036
Number of Sequences: 237096
Number of extensions: 1793487
Number of successful extensions: 4020
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4010
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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