Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M04
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z81069-6|CAB02993.1| 237|Caenorhabditis elegans Hypothetical pr... 34 0.15
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 31 0.78
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 31 0.78
U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream o... 28 7.2
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +3
Query: 78 ARAD---DYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 248
+RAD DY++AL +A K+++ P E AF CK+V +QL + +AL + +
Sbjct: 17 SRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKTPAHQM-G 75
Query: 249 DLLFEKAYTQYRLDSPKEALQTVDSAPXIDTRFKGIKGSNF 371
+ FEKAY YR D EA++ +++ D + +K F
Sbjct: 76 HVGFEKAYIHYRQDELDEAIKELNTCDKDDVKALELKAQVF 116
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/116 (29%), Positives = 49/116 (42%)
Frame = +1
Query: 352 ELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDE 531
EL+AQ+ Y+ E YQ Y++Y LLKN +D+ DE + + E
Sbjct: 110 ELKAQVFYKQENYQQAYDIYLYLLKNHSDD-SDELRRANFLAVQARLEAQGVKQAVAETE 168
Query: 532 NTYELAYNSGSTLAMRGKYNEALSVLKRAEXACSXSVIDDGGTXGXG*EEAAIIRV 699
++Y YN K +AL L++A C S D+ EE IRV
Sbjct: 169 DSYSQLYNRACVEIEAEKLPQALESLEKALKTCRKSFEDEDREEDEIEEELDSIRV 224
>Z81069-6|CAB02993.1| 237|Caenorhabditis elegans Hypothetical
protein F25H9.6 protein.
Length = 237
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = -2
Query: 472 RPCWLSSHLHTHQWCSSVDHGINCSSLGIALSGIKFEPLIPLKRVSIXGALSTVCSASLG 293
+PC+ + ++TH W ++ + + S +KF+ + P+++ I G + T AS+G
Sbjct: 161 KPCYFAPAMNTHMW----ENPLTMQHRTVLKSQLKFKEICPIQKELICGDVGTGAMASIG 216
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 605 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 507
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 605 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 507
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical
protein K09C4.5 protein.
Length = 515
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 481 LQQRPCWLSSHLHTHQWCSSVD--HGINCSSLGIALSGIKFEPLIPLKRVSIXGALSTVC 308
L + P WL + +++ HG NC + S IK + L ++S+ AL +C
Sbjct: 205 LPESPKWLVRQNKIEEASRAIEFYHGENCCLNEVVSSYIKEKNLTQEDQISLRQALKVLC 264
Query: 307 SASL 296
S SL
Sbjct: 265 SVSL 268
>Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical
protein C06H2.7 protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 180 LQLHNFKEALATLTNAKNSALAADLLFEKAYTQYRLDSPK-EALQTVDSAPXI 335
L + F E +AT+ N K+ + LLF + T +RL+ + A T S P I
Sbjct: 197 LNIGKFDEMVATVNNIKDLRIRQQLLFFQLITIFRLNIARINASVTAASLPLI 249
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 586 TSPALPKCCPSCMPI--RMCFHQTAAAL 509
T+PA +C PSCMP + C QT AA+
Sbjct: 122 TTPAPVQCQPSCMPACEQSCVVQTPAAV 149
>AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream of
daf-16 (regulatedby daf-16) protein 19 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 659 VPPSSITLSE-QAXSALFKTDKASLYFPRIAKV---LPELYANSY 537
VP SI L + Q S TDKA LYF + K LP Y +Y
Sbjct: 181 VPWDSIELKKTQIFSNPMHTDKADLYFANVEKFSISLPAFYLKTY 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,203,808
Number of Sequences: 27780
Number of extensions: 273964
Number of successful extensions: 745
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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