Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L23
(924 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 8e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 2e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.004
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.0
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 191 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 370
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 371 -GCSTWLVSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGSVSWI 505
G ++ +LW+PD+++ N+A + Y V++NGS ++
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 191 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 370
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 371 -GCSTWLVSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGSVSWI 505
G ++ +LW+PD+++ N+A + Y V++NGS ++
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 5e-07
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +2
Query: 239 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 412
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 413 PDVVLLNAAATTAE-DYALRARVSNNGSVSW 502
PD+VL N A E A +A + + G V W
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D QTC KFGS
Sbjct: 161 PFDEQTCVLKFGS 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.0 bits (104), Expect = 5e-07
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 320 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGS 493
++ +W D +L W+ E+G L V S+ +WRPD+VL N A E A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 494 VSW 502
V W
Sbjct: 137 VEW 139
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D QTC KFGS
Sbjct: 157 PFDEQTCVMKFGS 169
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWI 505
Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.8 bits (101), Expect = 1e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 320 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGS 493
++ W D +L WN E+G L V SE +W PD+VL N A E +A + G
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGD 145
Query: 494 VSW 502
VSW
Sbjct: 146 VSW 148
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D Q+C KFGS
Sbjct: 166 PFDEQSCIMKFGS 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWIKRLDISTPISMQLDNWP--NRHADL 574
Y V+++GS ++ + M + +P ++H D+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDM 127
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.4 bits (100), Expect = 1e-06
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 239 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 412
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 413 PDVVLLNAAATTAE-DYALRARVSNNGSVSWI 505
PD+VL N A E Y + NG V W+
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWV 142
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 546 TIGPTDMQTCTFKFGS 593
T P D QTC KFGS
Sbjct: 156 TYFPFDQQTCIMKFGS 171
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWIKRLDISTPISMQLDNWP--NRHADL 574
Y V+++GS ++ + M + +P ++H D+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDM 127
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.6 bits (98), Expect = 3e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 242 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 418
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 419 VVLLNAAATTAEDYALRAR--VSNNGSVSWI 505
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWI 505
Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWI 505
Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAE 454
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A +
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 455 -DYALRARVSNNGSVSWI 505
Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 239 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 412
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 413 PDVVLLNAAATTAE-DYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 556
PD+VL N A E +A V +G V W + S+ ++ +P
Sbjct: 113 PDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D+QTC K GS
Sbjct: 161 PYDVQTCVLKLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 43.2 bits (97), Expect = 3e-06
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 209 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 382
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 383 WLVSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGSVSW 502
V SE +W PD+VL N A E +A + + G V W
Sbjct: 95 LHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVW 135
Score = 23.0 bits (47), Expect = 3.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D QTC KFGS
Sbjct: 153 PFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.9 bits (94), Expect = 8e-06
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 206 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 385
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 386 L-VSSERLWRPDVVLLNAAATTAE-DYALRARVSNNGSVSWI 505
L + RLW+PDV++ N+A + Y V NNG+ ++
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.7 bits (91), Expect = 2e-05
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 281 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 451
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 452 EDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 556
R+ +G V + RL I M L+N+P
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFP 138
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 242 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 409
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 410 RPDVVLLNAA 439
PD+VL N A
Sbjct: 104 LPDIVLYNNA 113
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 555 PTDMQTCTFKFGS 593
P D QTC KFGS
Sbjct: 153 PFDQQTCFMKFGS 165
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.5 bits (88), Expect = 4e-05
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 323 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAEDYAL---RARVSNNGS 493
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 494 VSWIKRLDISTPISMQLDNWP 556
+ + RL I M+L N+P
Sbjct: 150 ILYSMRLTIKAKCPMELRNFP 170
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 248 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 424
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 425 L--LNAAATTAEDYALRARVSNNGSV 496
+ + + E ++ V N+G++
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTI 147
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.004
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 332 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAEDYALRARVSN 484
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 485 NGSVSWIKRLDISTPISMQLDNWPNRHADLHVQV 586
+GS++ RL I+ M L +P H+++
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.004
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 332 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAEDYALRARVSN 484
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 485 NGSVSWIKRLDISTPISMQLDNWPNRHADLHVQV 586
+GS++ RL I+ M L +P H+++
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.1 bits (72), Expect = 0.004
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 332 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAEDYALRARVSN 484
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 485 NGSVSWIKRLDISTPISMQLDNWPNRHADLHVQV 586
+GS++ RL I+ M L +P H+++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 3.0
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = +2
Query: 290 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAED 457
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 458 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPN 559
++ + ++ ++ ++ +L + +M+ +++P+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPH 141
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 385 PSAAAPFPCVPTQS 344
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,363
Number of Sequences: 438
Number of extensions: 4164
Number of successful extensions: 70
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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