Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L17
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 39 0.005
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 39 0.005
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 39 0.005
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 39 0.005
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 36 0.038
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 36 0.038
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 35 0.066
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 35 0.066
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 35 0.066
AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 34 0.12
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 34 0.15
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 33 0.20
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 33 0.20
Z77656-4|CAH04701.1| 536|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.35
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 33 0.35
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 33 0.35
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 33 0.35
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 33 0.35
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 33 0.35
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 32 0.47
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 32 0.62
U14635-11|AAK84494.2| 500|Caenorhabditis elegans Glutamate-gate... 32 0.62
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 32 0.62
Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 31 1.4
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 31 1.4
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 31 1.4
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 31 1.4
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 31 1.4
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF003138-1|AAK21371.3| 469|Caenorhabditis elegans Hypothetical ... 30 2.5
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 30 2.5
AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical ... 30 2.5
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 4.3
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.3
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 29 4.3
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 29 5.7
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 29 5.7
U88171-2|AAB42252.1| 434|Caenorhabditis elegans Glutamate-gated... 29 5.7
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 29 5.7
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 29 5.7
U14525-1|AAA50786.1| 434|Caenorhabditis elegans avermectin-sens... 29 5.7
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.7
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V WI RL + +P ++ L +P D QTC F HN +E++
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVE 188
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V WI RL + +P ++ L +P D QTC F HN +E++
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVE 188
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V WI RL + +P ++ L +P D QTC F HN +E++
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVE 188
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V WI RL + +P ++ L +P D QTC F HN +E++
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVE 188
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM-----DFXXDTRL 597
V ++G V+W+ + + ++ +P D Q CT FG +N +E+ + +L
Sbjct: 167 VDHHGDVTWVPPAMFKSSCRIDVEWFPFDEQCCTLVFGSWTYNSEEVRLHWYNNIQAVQL 226
Query: 598 XSXFXSGAWDV 630
SG WDV
Sbjct: 227 HDYSYSGIWDV 237
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM-----DFXXDTRL 597
V ++G V+W+ + + ++ +P D Q CT FG +N +E+ + +L
Sbjct: 167 VDHHGDVTWVPPAMFKSSCRIDVEWFPFDEQCCTLVFGSWTYNSEEVRLHWYNNIQAVQL 226
Query: 598 XSXFXSGAWDV 630
SG WDV
Sbjct: 227 HDYSYSGIWDV 237
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDE--MDFXXDTRL--X 600
+ + G+V W+ + + ++ +P D Q C+ TFG +N DE +DF R+
Sbjct: 145 ILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYNRDEIKLDFLTSDRVDFS 204
Query: 601 SXFXSGAWDV 630
S WD+
Sbjct: 205 EYSTSSIWDM 214
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDE--MDFXXDTRL--X 600
+ + G+V W+ + + ++ +P D Q C+ TFG +N DE +DF R+
Sbjct: 145 ILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYNRDEIKLDFLTSDRVDFS 204
Query: 601 SXFXSGAWDV 630
S WD+
Sbjct: 205 EYSTSSIWDM 214
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDE--MDFXXDTRL--X 600
+ + G+V W+ + + ++ +P D Q C+ TFG +N DE +DF R+
Sbjct: 145 ILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYNRDEIKLDFLTSDRVDFS 204
Query: 601 SXFXSGAWDV 630
S WD+
Sbjct: 205 EYSTSSIWDM 214
>AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical
protein Y46G5A.26a protein.
Length = 515
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDT 591
R+ NNGS+ + +RL + M L +P D Q C F + D++ + T
Sbjct: 185 RLRNNGSILYSRRLSLILTCGMDLTLFPFDTQLCKMGFESYGYTADKVKYLWST 238
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V R+ + P S+ L N+P D+Q C+ + +N E++
Sbjct: 162 NGTVMVNYRVRVKGPCSLDLSNFPLDLQKCSLIYESFNYNRQEVE 206
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NG+V RL + P M L +P D TC+ TF +N DE+
Sbjct: 175 NGTVWTNYRLKLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEV 218
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V W+ R+ + P SM +P D Q+C T +N E+D
Sbjct: 176 NGTV-WVNYRVQVKGPCSMDFSAFPMDQQSCHLTLESFSYNNQEVD 220
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
NG+V W+ R+ + P SM +P D Q+C T +N E+D
Sbjct: 176 NGTV-WVNYRVQVKGPCSMDFSAFPMDQQSCHLTLESFSYNNQEVD 220
>Z77656-4|CAH04701.1| 536|Caenorhabditis elegans Hypothetical
protein F07B10.5 protein.
Length = 536
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
R+ +G++ + R+ + M + +P D Q C G ++ DE+ +
Sbjct: 171 RLEPDGTILYSSRITVKAKCQMDMSRYPLDKQACRLVIGSYAYSSDEVQY 220
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
++ +NGS+ R+ ++ P S L +P D Q C + HN D++
Sbjct: 159 QIYSNGSIWHNYRIKLTGPCSSTLRTFPIDQQRCMLFYESFTHNTDQV 206
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF-----XXDTRL 597
V + G + W+ + + ++ +P D Q C+ TFG DE+ L
Sbjct: 133 VEHTGDMLWVPPAVYKSSCLIDVEFFPFDEQVCSLTFGSWTFRKDELQLSYLSGKRHVEL 192
Query: 598 XSXFXSGAWDV 630
SG WD+
Sbjct: 193 NDYLPSGVWDL 203
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NG+V W+ R+ +S P S +L +P D Q C F +N E+
Sbjct: 145 NGTV-WLNYRVQVSAPCSFELSRFPIDAQECHLVFESYSYNIAEV 188
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF-XXDTRLX 600
R R V + K +D++ P+S+ ++P D+Q C FG + + F DT +
Sbjct: 140 RVRYDGRVEVDFNKLVDLTCPMSVL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVP 197
Query: 601 SXFXSGAWDVTA 636
+ WD+ +
Sbjct: 198 KKSKNSEWDIVS 209
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF-----XXDTRL 597
V + G + W+ + + ++ +P D Q C+ TFG DE+ L
Sbjct: 133 VEHTGDMLWVPPAVYKSSCLIDVEFFPFDEQVCSLTFGSWTFRKDELQLSYLSGKRHVEL 192
Query: 598 XSXFXSGAWDV 630
SG WD+
Sbjct: 193 NDYLPSGVWDL 203
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF-XXDTRLX 600
R R V + K +D++ P+S+ ++P D+Q C FG + + F DT +
Sbjct: 140 RVRYDGRVEVDFNKLVDLTCPMSVL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVP 197
Query: 601 SXFXSGAWDVTA 636
+ WD+ +
Sbjct: 198 KKSKNSEWDIVS 209
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFG 546
NG + + +S+P +++DN+P D+Q C + G
Sbjct: 137 NGEIRTSRPAVVSSPCPLEIDNFPYDVQKCNISMG 171
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 415 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDTR 594
+ + A V G+V+WI I + ++ + +P D Q CT FG ++ D T
Sbjct: 125 WPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDLINTTI 184
Query: 595 LXSXF-XSGAWDV 630
+ + +G W++
Sbjct: 185 SPATYKPNGEWEL 197
>U14635-11|AAK84494.2| 500|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 4 protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
++ ++G + + +RL + SM L +P D Q C F + ++++ D
Sbjct: 163 KIRSDGKLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAYTTADIEYIWD 215
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 415 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDTR 594
+ + A V G+V+WI I + ++ + +P D Q CT FG ++ D T
Sbjct: 125 WPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDLINTTI 184
Query: 595 LXSXF-XSGAWDV 630
+ + +G W++
Sbjct: 185 SPATYKPNGEWEL 197
>Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical
protein F58G6.4 protein.
Length = 466
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
V +NG++ R+ ++ P M+L +P D Q C TF +N E+
Sbjct: 140 VFSNGTLWTNYRMKLTGPCDMKLKRFPFDKQKCYLTFESFNYNTGEV 186
>Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NGSV R+ + P M L +P D CT TF +N DE+
Sbjct: 170 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 213
>Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NGSV R+ + P M L +P D CT TF +N DE+
Sbjct: 151 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 194
>Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NGSV R+ + P M L +P D CT TF +N DE+
Sbjct: 170 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 213
>Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NGSV R+ + P M L +P D CT TF +N DE+
Sbjct: 151 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 194
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
R++ +G V++ RL + SM L N+P D Q CT
Sbjct: 161 RINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCT 195
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
+++ G + W+ + + ++ +P D Q CT FG +N +E+
Sbjct: 137 INHKGDMLWVPPAIYKSSCIIDVEFFPFDEQVCTLVFGSWTYNENEI 183
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
+++ G + W+ + + ++ +P D Q CT FG +N +E+
Sbjct: 137 INHKGDMLWVPPAIYKSSCIIDVEFFPFDEQVCTLVFGSWTYNENEI 183
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
+++ G + W+ + + ++ +P D Q CT FG +N +E+
Sbjct: 137 INHKGDMLWVPPAIYKSSCIIDVEFFPFDEQVCTLVFGSWTYNENEI 183
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A+++ NG+V W + + ++ +P D Q C FG + E+D
Sbjct: 130 KAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGLEVD 180
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A+++ NG+V W + + ++ +P D Q C FG + E+D
Sbjct: 130 KAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGLEVD 180
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/96 (22%), Positives = 36/96 (37%)
Frame = +1
Query: 244 SESTVTNTGRSANELDRQTTELERRGSGAAALGWCPRNACGGLTWYC*TRLQPPPGYYAL 423
S S++++ S L TT + + + G C + A TWY Y +
Sbjct: 64 SSSSLSDESSSNLVLMDSTTPCDSGWTKSTVNGMCYKIATADTTWYAAEDWCYSQRYGSH 123
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 531
V + WI +ST +DNW ++C
Sbjct: 124 LTSVHSEAEAQWIAATYVSTGWFPYMDNWLGLRRSC 159
>AF003138-1|AAK21371.3| 469|Caenorhabditis elegans Hypothetical
protein F12B6.3 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHN 561
NG++ W+ R+ + +P SM L +P D Q C F +N
Sbjct: 140 NGTI-WLNYRIRVQSPCSMDLARFPIDTQYCQLVFESYSYN 179
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 169 SGTPPPTPGIVVNLTLHLRHANIRESESTVTNTG--RSANELDRQTTELERRGSG 327
+GTPPPTP V + L + + ST TN R N Q+T RR G
Sbjct: 1224 AGTPPPTPPSVAAM-LEPKEELDEDEPSTSTNVPVLRRVNSPPAQSTSYARRNDG 1277
>AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical
protein Y39A3B.2 protein.
Length = 382
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+S G++S+ R+ ++ ++ L ++P D QTC H +EM+
Sbjct: 93 ISPQGTISYGTRVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMN 140
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
R+ N+G+V + R+ + M L +P D+Q C+ + ++++
Sbjct: 172 RIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEY 221
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 145 LTRSSQRTSGTPPPTPGIVVNLTLHLRHANIRESESTVTNTGRS-ANELDRQTTELERR 318
LTR + + PP P T + RH + E E T G S A ++ TEL R+
Sbjct: 223 LTRPASKAQRAPPTEPVAARTATANQRHIKLFEEELDTTPGGESYATVVNGCLTELLRK 281
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NG+V W+ R+ ++ P + L +P D Q+C F +N E+
Sbjct: 196 NGTV-WLNFRVSLTGPCKLDLTYFPMDRQSCNLVFESYSYNTAEV 239
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
R+ N+G+V + R+ + M L +P D+Q C+ + ++++
Sbjct: 172 RIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEY 221
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 216 QGQVDYDSWSRGGSPARTLRGASQ 145
+ VDYD W +GGS T+R +
Sbjct: 118 RSNVDYDCWGKGGSTLLTIRNQQE 141
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 NGSVSWIK-RLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NG+V W+ R+++ P + L+ +P D+Q C + +N E+
Sbjct: 166 NGTV-WVNYRVNVKGPCDLSLELFPLDIQECHLIYESFNYNNQEV 209
>U88171-2|AAB42252.1| 434|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 2 protein.
Length = 434
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
R+ +G + + R+ +++ M+L +P D Q+C H +++ + D
Sbjct: 142 RIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWD 194
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 348 SSERLWRPDVVLLNAAA 398
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDT 591
V+++G+V+W+ + +++ +P D Q C F H+ E++ +T
Sbjct: 220 VTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQCDLKFASWSHDITEINLGLNT 272
>U14525-1|AAA50786.1| 434|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl beta protein.
Length = 434
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
R+ +G + + R+ +++ M+L +P D Q+C H +++ + D
Sbjct: 142 RIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWD 194
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 442 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEM 573
NG V RL++ TP S+ L +P D +C N DE+
Sbjct: 127 NGLVWSNFRLNVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEV 170
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 427 ARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
A V NG V W + S+ ++ +P D QTC FG +N +D
Sbjct: 129 AIVYYNGLVVWKPPSIYKSFCSIDIEYFPYDTQTCWMKFGGWTYNGFLLD 178
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = -3
Query: 513 GPIV*LHRN-WSANVQALYP---GDGA--VIRYTGAESVVPRRWLQPRLAVPRQASTSVP 352
G I L RN + +V ++P +G V R +GAES + ++PRL + +P
Sbjct: 238 GIIPQLERNAYGGSVDTVFPVVANEGIIDVTRISGAESPTMAQMMEPRLRCGADSVADIP 297
Query: 351 RTPAKCCSPTAP 316
+PA + P
Sbjct: 298 LSPAASINGDTP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,940,016
Number of Sequences: 27780
Number of extensions: 321979
Number of successful extensions: 1221
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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