Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L17
(872 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.005
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.024
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.042
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 29 0.042
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 29 0.042
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 29 0.074
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.074
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.074
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.098
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.13
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 28 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.23
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.23
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.23
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.23
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.23
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.30
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.52
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.52
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.6
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 2.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 6.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 8.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 35.9 bits (79), Expect = 5e-04
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Frame = +1
Query: 415 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDTR 594
Y + NG V W+ + ++ + +P D QTC FG N D++
Sbjct: 127 YKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNN 186
Query: 595 -----LXSXFXSGAWDV 630
L + SG WD+
Sbjct: 187 KNFVDLSDYWKSGTWDI 203
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 354 ERLWRPDVVLLNAA 395
+++W+PD+VL N A
Sbjct: 106 DKVWKPDIVLFNNA 119
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.7 bits (76), Expect = 0.001
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXDTR 594
V ++GSVS + + + +WP D C FG +H+ +E++ D +
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFG 546
R+S +G + + RL I M+L N+P D Q+C G
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILG 181
Score = 22.2 bits (45), Expect = 6.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 354 ERLWRPDVVLLN 389
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.005
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFG 546
R+ +G V + RL I M L+N+P D Q C FG
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 30.3 bits (65), Expect = 0.024
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A + G VSW + + ++ +P D Q+C FG +N ++D
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 26.2 bits (55), Expect = 0.39
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAA 395
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.5 bits (63), Expect = 0.042
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 418 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
A +A + + G V W + + ++ +P D QTC FG ++ ++D
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.5 bits (63), Expect = 0.042
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 418 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
A +A ++ G V W + + ++ +P D QTC FG ++ ++D
Sbjct: 126 ATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 29.5 bits (63), Expect = 0.042
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
G Y V NNG+ ++ + + + +P D Q C FG ++ ++D
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQ 181
Query: 589 TR----LXSXFXSGAWDV 630
+ S +G WD+
Sbjct: 182 DEAGGDISSFITNGEWDL 199
Score = 25.4 bits (53), Expect = 0.69
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 28.7 bits (61), Expect = 0.074
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
R+ NGSV + R+ ++ M L +P D Q C+ D++ F
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 28.7 bits (61), Expect = 0.074
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
R+ NGSV + R+ ++ M L +P D Q C+ D++ F
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 28.7 bits (61), Expect = 0.074
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
R+S +GSV++ R + M L +P D Q CT
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 28.3 bits (60), Expect = 0.098
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
+ +G V RL + ++L+ +P D+Q C F HN +M D
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDMVLYWD 175
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAA 395
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A + + G V W + + ++ +P D QTC FG ++ +D
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGV 413
G + V SE +W PD+VL N A GV
Sbjct: 91 GVTELYVPSEHIWLPDIVLYNNADGEYGV 119
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A + G V W + + + +P D QTC FG ++ ++D
Sbjct: 124 KAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
+A V +G V W + S+ ++ +P D+QTC G ++ ++D
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 531
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 531
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V++NGS ++ + + + +P D Q C FG ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V++NGS ++ + + + +P D Q C FG ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 531
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.30
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V++NGS ++ + + + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.52
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V+++GS ++ + M + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +1
Query: 448 SVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDFXXD 588
++ ++ +L + +M +P D Q C H DEM F D
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V+++GS ++ + M + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V+++GS ++ + + + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V+++GS ++ + + + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +1
Query: 409 GYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
G Y V+++GS ++ + + + +P D Q C FG ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGAVG 328
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA 395
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/48 (18%), Positives = 22/48 (45%)
Frame = +1
Query: 433 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMD 576
VS+ G V W+ + + ++ +P D Q C + ++ +++
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/41 (19%), Positives = 20/41 (48%)
Frame = +1
Query: 457 WIKRLDISTPISMQLDNWPXDMQTCTCTFGXXMHNXDEMDF 579
++ +L + +M+ +++P D Q C+ H ++ F
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 406 PGYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
P ++ALR + NG+V+++ R + +L+ +P D C+
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 201
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 406 PGYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
P ++ALR + NG+V+++ R + +L+ +P D C+
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 201
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 406 PGYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
P ++ALR + NG+V+++ R + +L+ +P D C+
Sbjct: 212 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 252
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 406 PGYYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 534
P ++ALR + NG+V+++ R + +L+ +P D C+
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 201
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.2 bits (45), Expect = 6.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 353 RGHQPSAAAPLPLRSNSVVCRSNSFADLPVFVTVDSDSRMLACLKCRVRLTTIPGV 186
RG+QPS + RS V R+ S + + +DS + + R R T + +
Sbjct: 347 RGNQPSTSECGEFRSVVVQKRNGSMIECNISPRSSADSCQVGIMAQRHRDTIVSAI 402
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = +1
Query: 508 WPXDMQTCTCTFGXXMHNXDEM 573
WP D+ CT H +E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,754
Number of Sequences: 438
Number of extensions: 4032
Number of successful extensions: 71
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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