Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L15
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 142 3e-34
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 142 3e-34
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 142 3e-34
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 41 0.001
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 40 0.002
06_01_0080 + 644021-645463 33 0.38
11_01_0472 + 3656471-3656780,3656902-3656996 30 2.0
06_01_0351 + 2537022-2538281 29 3.5
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 4.6
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 6.1
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 28 8.1
06_01_0350 + 2534422-2535615 28 8.1
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 28 8.1
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 142 bits (344), Expect = 3e-34
Identities = 65/106 (61%), Positives = 84/106 (79%)
Frame = +3
Query: 378 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 557
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 558 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE 695
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPE 205
Score = 102 bits (245), Expect = 3e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 95 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 274
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 275 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 373
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 694 KILDIKPEXLRAKFQAGXANVAALSLAXGY-QLXFSPH 804
++LD+ E L KF +G + VA++SLA Y + +PH
Sbjct: 205 EVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPH 242
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 142 bits (344), Expect = 3e-34
Identities = 65/106 (61%), Positives = 84/106 (79%)
Frame = +3
Query: 378 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 557
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 558 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE 695
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPE 205
Score = 102 bits (245), Expect = 3e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 95 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 274
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 275 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 373
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 694 KILDIKPEXLRAKFQAGXANVAALSLAXGY-QLXFSPH 804
++LD+ E L KF +G + VA++SLA Y + +PH
Sbjct: 205 EVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPH 242
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 142 bits (344), Expect = 3e-34
Identities = 65/106 (61%), Positives = 84/106 (79%)
Frame = +3
Query: 378 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 557
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 558 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE 695
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPE 205
Score = 103 bits (246), Expect = 2e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 95 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 274
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 275 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 373
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDL 98
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 694 KILDIKPEXLRAKFQAGXANVAALSLAXGY-QLXFSPH 804
++LD+ + L KF +G + VA++SLA Y + +PH
Sbjct: 205 EVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPH 242
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 53 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 232
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 233 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFT 361
SS I L GK M + D L KL ++G+ G FT
Sbjct: 63 SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFT 107
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 65 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 241
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 242 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFT 361
I L GK M + D L KL ++G+ G FT
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFT 243
>06_01_0080 + 644021-645463
Length = 480
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 560 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 453
I+D N N R K++EERGLL+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>11_01_0472 + 3656471-3656780,3656902-3656996
Length = 134
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 277 SHQRPPGQQSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQLVLVPL 438
SH+ P S + T R L H RRP L+++ C KS + ++ PL
Sbjct: 24 SHRIDPPPSPSSLRRLLTSPPHRLLSSHGRRPTLQTLPRCRPRKSPPRALIPPL 77
>06_01_0351 + 2537022-2538281
Length = 419
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 358 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 441
H R RLR+V WR+ ++++L L+P P
Sbjct: 62 HADRVRLRAVCRPWRSSARVELDLLPPP 89
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 676 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 554
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 361 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 266
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 20 PHESRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 166
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>06_01_0350 + 2534422-2535615
Length = 397
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 358 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 441
H R RLR+V WR+ ++L+ L+P P
Sbjct: 30 HGDRVRLRAVCRPWRSSARLERKLLPPP 57
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 546 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPENS 701
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A + S
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKIS 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,652,981
Number of Sequences: 37544
Number of extensions: 528060
Number of successful extensions: 1488
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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