Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L13
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 168 9e-42
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 167 2e-41
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 167 2e-41
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 167 2e-41
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 138 7e-33
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 138 7e-33
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 138 7e-33
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB... 31 2.6
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA... 31 2.6
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 168 bits (408), Expect = 9e-42
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = +1
Query: 4 WHFSLRLSSSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYK 183
+ F+ + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYK
Sbjct: 2 FRFTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK 61
Query: 184 AGMTHVVREPDRPGSKINKKEIVEAVTIIETPP 282
AGMTH+VRE DRPGSKINKKE+VEAVT++ETPP
Sbjct: 62 AGMTHIVREADRPGSKINKKEVVEAVTVLETPP 94
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 74 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 132
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2
Query: 581 WQDELGRXSIEKDFXKMIRYCXVVGVIAHTXMKLL 685
W D+LG+ SIE DF KM+RYC V+ VIAH+ ++L+
Sbjct: 148 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLI 182
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPP 282
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2
Query: 581 WQDELGRXSIEKDFXKMIRYCXVVGVIAHTXMKLL 685
W D+LG+ SIE DF KM+RYC V+ VIAH+ ++L+
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLI 171
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPP 282
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPP 282
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2
Query: 581 WQDELGRXSIEKDFXKMIRYCXVVGVIAHTXMKLL 685
W D+LG+ SIE DF KM+RYC V+ VIAH+ ++L+
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLI 171
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPP 282
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
Score = 77.8 bits (183), Expect = 2e-14
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNC 400
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNC
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNC 109
Query: 401 SPL 409
S +
Sbjct: 110 SSI 112
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPP 282
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2
Query: 581 WQDELGRXSIEKDFXKMIRYCXVVGVIAHTXMKLL 685
W D+LG+ SIE DF KM+RYC V+ VIAH+ ++L+
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLI 158
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPP 282
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 221 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 52.0 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2
Query: 581 WQDELGRXSIEKDFXKMIRYCXVVGVIAHTXMKLL 685
W D+LG+ SIE DF KM+RYC V+ VIAH+ ++L+
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLI 158
>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
isoform B protein.
Length = 4705
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -3
Query: 315 SMYPTTPTQTXRRSLDDGDSLH-DLFLVDF*TGT-VRFSNHVGHTGLITDKSSQMNRFAR 142
+++PTT T + L ++ H +L +V + G+ V NH ++ Q+N +A
Sbjct: 227 AIHPTTGEITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAP 286
Query: 141 VVFRERLDLTTMTTGPL-FGI 82
+F + T T+ PL +GI
Sbjct: 287 EIFTKTFSSVTPTSNPLIYGI 307
>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
isoform A protein.
Length = 4705
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -3
Query: 315 SMYPTTPTQTXRRSLDDGDSLH-DLFLVDF*TGT-VRFSNHVGHTGLITDKSSQMNRFAR 142
+++PTT T + L ++ H +L +V + G+ V NH ++ Q+N +A
Sbjct: 227 AIHPTTGEITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAP 286
Query: 141 VVFRERLDLTTMTTGPL-FGI 82
+F + T T+ PL +GI
Sbjct: 287 EIFTKTFSSVTPTSNPLIYGI 307
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,387,256
Number of Sequences: 53049
Number of extensions: 688909
Number of successful extensions: 1427
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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