Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_L04
(840 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 175 8e-44
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 160 3e-39
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 159 3e-39
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 157 2e-38
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 157 2e-38
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 157 2e-38
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 157 2e-38
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 157 2e-38
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 157 2e-38
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 155 9e-38
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 154 2e-37
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 154 2e-37
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 154 2e-37
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 154 2e-37
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 150 3e-36
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 150 3e-36
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 147 1e-35
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 146 2e-35
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 146 2e-35
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 138 1e-32
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 130 3e-30
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 125 9e-29
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 105 6e-23
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 87 2e-17
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 58 2e-08
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 39 0.010
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 37 0.030
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 6.0
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 6.0
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 6.0
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 7.9
AY268061-1|AAP50844.1| 545|Drosophila melanogaster peptide rece... 29 7.9
AY128481-1|AAM75074.1| 545|Drosophila melanogaster RE56254p pro... 29 7.9
AE014298-675|AAX52478.1| 545|Drosophila melanogaster CG6986-PD,... 29 7.9
AE014298-674|AAX52477.1| 545|Drosophila melanogaster CG6986-PC,... 29 7.9
AE014298-673|AAN09130.1| 545|Drosophila melanogaster CG6986-PB,... 29 7.9
AE014298-672|AAF45980.2| 545|Drosophila melanogaster CG6986-PA,... 29 7.9
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 175 bits (425), Expect = 8e-44
Identities = 86/183 (46%), Positives = 120/183 (65%)
Frame = +2
Query: 11 NAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 190
NA + FP WK A ++ IHKPGKP SYRPISLLS++ K++ERL+ RL + +T
Sbjct: 481 NAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMT 540
Query: 191 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 370
+IL D QFGFR HS V+QVHRLT+HIL + ++ A+F D+ +AFD+VWH+GL
Sbjct: 541 ERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEY--CNAVFIDMQQAFDRVWHDGL 598
Query: 371 IYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
I K+ + P +++ +L +R F RV + S PR + AGVPQGS L PLL+S++
Sbjct: 599 ISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTA 657
Query: 551 DIP 559
D+P
Sbjct: 658 DLP 660
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 534 LVCISMIYPGSP-ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISP 710
L C + + P + LA +ADD A+ YS + R LQ + TL W ++W + ++P
Sbjct: 659 LPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNP 718
Query: 711 TKSAAVLFKRGRPPNITSSIPL 776
K+ F +T+ I L
Sbjct: 719 QKTINPCFTLKTLSPVTAPIEL 740
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 160 bits (388), Expect = 3e-39
Identities = 83/176 (47%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK NE SYRPISLLS + KI+ERLL KRL+ K +
Sbjct: 533 YPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLH 592
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMP 705
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + + W KW I ++ K+
Sbjct: 709 IYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGH 768
Query: 726 VLF 734
V+F
Sbjct: 769 VIF 771
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 159 bits (387), Expect = 3e-39
Identities = 82/176 (46%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK +NE SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 545 YPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 604
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 661
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMP 717
Score = 33.9 bits (74), Expect = 0.28
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 721 IYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGH 780
Query: 726 VLF--KRGRPPN 755
V+F K P N
Sbjct: 781 VIFTLKNDLPTN 792
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 157 bits (380), Expect = 2e-38
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 417 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 476
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 533
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 589
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 593 IYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGH 652
Query: 726 VLF--KRGRPPNI 758
V++ K P N+
Sbjct: 653 VIYTLKNDIPTNL 665
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 157 bits (380), Expect = 2e-38
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 709 IYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGH 768
Query: 726 VLF--KRGRPPNI 758
V++ K P N+
Sbjct: 769 VIYTLKNDIPTNL 781
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 157 bits (380), Expect = 2e-38
Identities = 78/183 (42%), Positives = 110/183 (60%)
Frame = +2
Query: 11 NAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 190
N+ + FP WK A +I IHK GK + SYRPISLL ++GKI ERL+ RL
Sbjct: 284 NSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKD 343
Query: 191 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 370
K + QFGFR +H +Q+HR+ L + K+ GA F DI +AFD+VWH GL
Sbjct: 344 VTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQAFDRVWHPGL 401
Query: 371 IYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
+YK + P +L L+++ FL R+F V+G +S + + AGVPQGS L P L+S++ +
Sbjct: 402 LYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFAS 460
Query: 551 DIP 559
D+P
Sbjct: 461 DMP 463
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF--KRGRPP 752
+A +ADDTA+ + + LQ + QW W + I+ K A V F + G P
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP 537
Query: 753 NIT 761
++
Sbjct: 538 GVS 540
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 157 bits (380), Expect = 2e-38
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 709 IYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGH 768
Query: 726 VLF--KRGRPPNI 758
V++ K P N+
Sbjct: 769 VIYTLKNDIPTNL 781
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 157 bits (380), Expect = 2e-38
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 495 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 554
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 611
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 667
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 671 IYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGH 730
Query: 726 VLF--KRGRPPNI 758
V++ K P N+
Sbjct: 731 VIYTLKNDIPTNL 743
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 157 bits (380), Expect = 2e-38
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
+P WK A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR +H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 395 VPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 552 IYPGSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAA 725
IY SP + L +ADDT + S + R + + T W KW I ++ K+
Sbjct: 709 IYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGH 768
Query: 726 VLF--KRGRPPNI 758
V++ K P N+
Sbjct: 769 VIYTLKNDIPTNL 781
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 155 bits (375), Expect = 9e-38
Identities = 77/183 (42%), Positives = 109/183 (59%)
Frame = +2
Query: 11 NAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 190
N+ + FP WK A +I IHK GK + SYRP SLL ++GKI ERL+ RL
Sbjct: 482 NSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKD 541
Query: 191 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 370
K + QFGFR +H +Q+HR+ L + K+ GA F DI +AFD+VWH GL
Sbjct: 542 VTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQAFDRVWHPGL 599
Query: 371 IYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
+YK + P +L L+++ FL R+F V+G +S + + AGVPQGS L P L+S++ +
Sbjct: 600 LYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFAS 658
Query: 551 DIP 559
D+P
Sbjct: 659 DMP 661
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF--KRGRPP 752
+A +ADDTA+ + + LQ + QW W + I+ K A V F + G P
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP 735
Query: 753 NIT 761
++
Sbjct: 736 GVS 738
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 154 bits (373), Expect = 2e-37
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K +
Sbjct: 89 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 148
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL +
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 205
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 261
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF 734
LA +ADDT I + L Q + +W +KW I I+ K+ +LF
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 154 bits (373), Expect = 2e-37
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K +
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSH 595
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF 734
LA +ADDT I + L Q + +W +KW I I+ K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 154 bits (373), Expect = 2e-37
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K +
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF 734
LA +ADDT I + L Q + +W +KW I I+ K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 154 bits (373), Expect = 2e-37
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K +
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF 734
LA +ADDT I + L Q + +W +KW I I+ K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 150 bits (363), Expect = 3e-36
Identities = 71/175 (40%), Positives = 109/175 (62%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK++ ++ I KPGK + SSYRPISLL+ + K++E++L R+ + N L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR KH ++QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P +++ +L NR F R + + SR + AGVPQGS L P+L++LY D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFP 655
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 588 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF---KRGRPPNI 758
FADDTAI + L + ++ +W WRI I+ K V F K+ PP +
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
Query: 759 TSSI 770
++I
Sbjct: 725 LNNI 728
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 150 bits (363), Expect = 3e-36
Identities = 77/184 (41%), Positives = 109/184 (59%)
Frame = +2
Query: 11 NAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 190
NA + FP WK + IHKPGKP E +SYRPISLL +I K++ERL+ R+ + +
Sbjct: 480 NAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIME 539
Query: 191 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 370
A I + QFGFR+ H V+Q+HR+ E IL + ++ +LF DI +AFD+VWH GL
Sbjct: 540 AQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEY--CNSLFLDIREAFDRVWHIGL 597
Query: 371 IYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
K+ +P +++ +L R F R S + AGVPQGS L PLL+ LY +
Sbjct: 598 QLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSH 656
Query: 551 DIPR 562
D+P+
Sbjct: 657 DMPQ 660
Score = 37.1 bits (82), Expect = 0.030
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 579 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF--KRGRPP 752
LA FADD + Y R +Q +W R+W I I+ +KS V F KR PP
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPP 730
Query: 753 NI 758
+
Sbjct: 731 PV 732
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 147 bits (357), Expect = 1e-35
Identities = 70/175 (40%), Positives = 108/175 (61%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK++ ++ I KPGK + SSYRPISLL+ + K++E++L R+ + N L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR KH ++QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P +++ +L N F R + + SR + AGVPQGS L P+L++LY D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFP 655
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 588 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLF---KRGRPPNI 758
FADDTAI + L + ++ +W WRI I+ K V F K+ PP +
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
Query: 759 TSSI 770
++I
Sbjct: 725 LNNI 728
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 146 bits (355), Expect = 2e-35
Identities = 74/185 (40%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Frame = +2
Query: 26 HCI----FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTA 193
HC+ FP WK A ++ I KPGKP + SYRPISLLS + KI E+L++ RL F+
Sbjct: 506 HCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDI 565
Query: 194 NKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLI 373
+ L Q+GFR+ + + +L +I + ++ + G + DI AFD VWH+GL+
Sbjct: 566 HNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLL 623
Query: 374 YKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIND 553
+KL +G P L+ I+++FL++R F + ++S R L AGVPQGS L P LF+++ +D
Sbjct: 624 HKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHD 683
Query: 554 IPRVS 568
IP+ +
Sbjct: 684 IPQAT 688
Score = 49.2 bits (112), Expect = 7e-06
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +3
Query: 558 PGSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLFK 737
P + L+LFADD A+Y + S +++ +Q + L +++KW+I I+P K+ A+ F
Sbjct: 685 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 744
Query: 738 RGRPPNITSSIPLR 779
+ R P LR
Sbjct: 745 KRRKPRYLPDRQLR 758
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 146 bits (355), Expect = 2e-35
Identities = 74/185 (40%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Frame = +2
Query: 26 HCI----FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTA 193
HC+ FP WK A ++ I KPGKP + SYRPISLLS + KI E+L++ RL F+
Sbjct: 454 HCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDI 513
Query: 194 NKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLI 373
+ L Q+GFR+ + + +L +I + ++ + G + DI AFD VWH+GL+
Sbjct: 514 HNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLL 571
Query: 374 YKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIND 553
+KL +G P L+ I+++FL++R F + ++S R L AGVPQGS L P LF+++ +D
Sbjct: 572 HKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHD 631
Query: 554 IPRVS 568
IP+ +
Sbjct: 632 IPQAT 636
Score = 49.2 bits (112), Expect = 7e-06
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +3
Query: 558 PGSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDISPTKSAAVLFK 737
P + L+LFADD A+Y + S +++ +Q + L +++KW+I I+P K+ A+ F
Sbjct: 633 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 692
Query: 738 RGRPPNITSSIPLR 779
+ R P LR
Sbjct: 693 KRRKPRYLPDRQLR 706
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 138 bits (333), Expect = 1e-32
Identities = 72/175 (41%), Positives = 102/175 (58%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK +I I KPGK SSYRPISLLS I K++E+ L RL T + I+
Sbjct: 486 FPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAH 545
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QFGFR H ++QV+R+T I R+ A+F D+++AFDKVW +GL++K+ +
Sbjct: 546 QFGFRESHGTIEQVNRITTEIRTAFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KIS 602
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P+ +++ +L +R F R S + AGVPQGS L P L+ +Y DIP
Sbjct: 603 LPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIP 657
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 522 PRYYLVCISMIYPGSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRID 701
P YL+ + I P + ++ FADDTAI R +L + + + +W WRI
Sbjct: 646 PTLYLIYTADI-PTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIK 704
Query: 702 ISPTKSAAVLFKRGR---PPNITSSIPL 776
++ K V F R PP + +SIPL
Sbjct: 705 VNEQKCKHVTFTLNRQDCPPLLLNSIPL 732
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 130 bits (313), Expect = 3e-30
Identities = 67/175 (38%), Positives = 104/175 (59%)
Frame = +2
Query: 35 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 214
FP WK++ +I I KP K + S YRPISLL+ + K++E+ L R+ + + L
Sbjct: 26 FPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSY 84
Query: 215 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMG 394
QF F +KH ++QV+R+T I R+ ALF D+A+AFD+VW +GL++K+ +
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLDVAQAFDRVWLDGLMFKIIQL- 141
Query: 395 VPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 559
+P + +++ +L R F R + S + AGVPQGS L P+L++LY DIP
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIP 196
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 125 bits (301), Expect = 9e-29
Identities = 65/182 (35%), Positives = 103/182 (56%)
Frame = +2
Query: 11 NAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 190
N +T +P W+ A +I I KP KP ++ +SYRPISLLS +GK E+++ +RL F+
Sbjct: 480 NQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIK 539
Query: 191 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 370
+ ++ Q F+S HS + + R+ L+ + + L D +AFD+V + +
Sbjct: 540 RHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHV--SILATDFERAFDRVGIHAV 597
Query: 371 IYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
+ +L G+ RL +I+ F++NRSFR R+ S L G+PQGS LS +LF + I
Sbjct: 598 LCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIE 657
Query: 551 DI 556
DI
Sbjct: 658 DI 659
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 105 bits (253), Expect = 6e-23
Identities = 58/176 (32%), Positives = 96/176 (54%)
Frame = +2
Query: 38 PAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQ 217
P +K + +I I KP +TSSYRPISL I KI ++++ KRLW VT N ++ D+Q
Sbjct: 484 PQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQ 543
Query: 218 FGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGV 397
FGF+ K ++++ + ++ T + D ++AFD+V + +I +L
Sbjct: 544 FGFK-KGKSTSDCLLYVDYLI----TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKT 598
Query: 398 PDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRV 565
+++ I++F+SNR RV S P L G+PQGS +S +LF + N + +
Sbjct: 599 GPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNI 654
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 87.4 bits (207), Expect = 2e-17
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Frame = +2
Query: 32 IFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILID 211
+FP WK+ ++ + K P N SYRP+ LL +GK++ER+L R+ + L
Sbjct: 453 VFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQG 512
Query: 212 EQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP-----TGALFFDIAKAFDKVWHNGLIY 376
+Q+GFR S + + +T+ L+ + + + D+ AF+ ++
Sbjct: 513 QQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILG 572
Query: 377 KLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYIND 553
+ N+GVPD + +I ++ +R Y E G RS Q++AGVPQGS L P+L+++ +
Sbjct: 573 AMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDG 630
Query: 554 IPRVS 568
I +S
Sbjct: 631 ILSIS 635
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 57.6 bits (133), Expect = 2e-08
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Frame = +2
Query: 35 FPAVWKEADVIGIHK-PGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILID 211
FPA WK V+ + K P K E SSYR I LL GK+ E ++ R+ +
Sbjct: 486 FPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CR 542
Query: 212 EQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNM 391
QFGFR + CV+ R H+ + F D AFD V + + +L ++
Sbjct: 543 WQFGFR-QGRCVEDAWR---HVKSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADL 598
Query: 392 GVPDRLVLIIRDFLSNRSFRYR-VEGTRSRPRQLTAGVPQGSALSPLLFSLYIN 550
G R + + + F S R R GT P +T G PQGS P ++ + ++
Sbjct: 599 GC--REMGLWQSFFSGRRAVIRSSSGTVEVP--VTRGCPQGSISGPFIWDILMD 648
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 38.7 bits (86), Expect = 0.010
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +2
Query: 329 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 508
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 509 GSALSPLLFSLYINDIPR 562
G LSP+LF+L ++ + R
Sbjct: 542 GDPLSPILFNLVMDRLLR 559
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 37.1 bits (82), Expect = 0.030
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +2
Query: 386 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRV 565
N P LV IR + SNR R Q+T GVPQGS L PLL++ + I R+
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLPCESSEGVFR-HQVTGGVPQGSVLGPLLWNTMYDGILRL 72
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 635 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 757
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 638 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 757
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 638 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 757
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 638 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 739
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
>AY268061-1|AAP50844.1| 545|Drosophila melanogaster peptide
receptor GPCR protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
>AY128481-1|AAM75074.1| 545|Drosophila melanogaster RE56254p
protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
>AE014298-675|AAX52478.1| 545|Drosophila melanogaster CG6986-PD,
isoform D protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
>AE014298-674|AAX52477.1| 545|Drosophila melanogaster CG6986-PC,
isoform C protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
>AE014298-673|AAN09130.1| 545|Drosophila melanogaster CG6986-PB,
isoform B protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
>AE014298-672|AAF45980.2| 545|Drosophila melanogaster CG6986-PA,
isoform A protein.
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 649 SRSQ*PPWDSGSGSGE*TSAPRKAQRCSSKGVALRTSLR 765
S +Q W SGSG GE + PR + S G +LR
Sbjct: 243 SSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLR 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,261,091
Number of Sequences: 53049
Number of extensions: 941475
Number of successful extensions: 2911
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2861
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -