Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_L03
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    73   7e-13
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    73   7e-13
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    30   3.5  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 72.5 bits (170), Expect = 7e-13
 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = +2

Query: 269 FAVYQSRHKHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLY 448
           + VYQ R K+ TFQ+R+KRLK+HQF+A++A  L+D +L+ +    S      L+ + N Y
Sbjct: 40  YGVYQERQKYFTFQERAKRLKMHQFLARKATDLYDRTLVANVMEDS------LLAQGNTY 93

Query: 449 -ALMPPFETFLNV-DKTARLRHFFDNVKTGELIIGAVINRTASGD 577
              M PFE FLNV DK     H    +K G+ II   + R ASG+
Sbjct: 94  MTQMAPFEFFLNVKDKRKGWAHRLSALKQGD-IIYTQVTRLASGN 137



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 166 VAQSINYHGQQLQKTWESERGEDDLAKIGV 255
           + Q++ YHGQ LQK W+ ERG DDL  +G+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGL 35



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 576 MMLKVLCTAGPTSRYVADIXVKAFLPV---GNIIQAVDKKNVSRNYLMNDTVCCEVIXVI 746
           +++K LCTA P   Y+ADI +KA +     G +   +DK+   R+++ ND + CE+  + 
Sbjct: 139 LIVKPLCTAEPKHAYLADIPIKAVILQDFWGPL--PLDKQGNPRSFVQNDILRCEINNIS 196

Query: 747 PXTDKMVCGMKGV 785
             T+++   M G+
Sbjct: 197 ADTERLSLNMIGM 209


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 72.5 bits (170), Expect = 7e-13
 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = +2

Query: 269 FAVYQSRHKHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLY 448
           + VYQ R K+ TFQ+R+KRLK+HQF+A++A  L+D +L+ +    S      L+ + N Y
Sbjct: 40  YGVYQERQKYFTFQERAKRLKMHQFLARKATDLYDRTLVANVMEDS------LLAQGNTY 93

Query: 449 -ALMPPFETFLNV-DKTARLRHFFDNVKTGELIIGAVINRTASGD 577
              M PFE FLNV DK     H    +K G+ II   + R ASG+
Sbjct: 94  MTQMAPFEFFLNVKDKRKGWAHRLSALKQGD-IIYTQVTRLASGN 137



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 166 VAQSINYHGQQLQKTWESERGEDDLAKIGV 255
           + Q++ YHGQ LQK W+ ERG DDL  +G+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGL 35



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 576 MMLKVLCTAGPTSRYVADIXVKAFLPV---GNIIQAVDKKNVSRNYLMNDTVCCEVIXVI 746
           +++K LCTA P   Y+ADI +KA +     G +   +DK+   R+++ ND + CE+  + 
Sbjct: 139 LIVKPLCTAEPKHAYLADIPIKAVILQDFWGPL--PLDKQGNPRSFVQNDILRCEINNIS 196

Query: 747 PXTDKMVCGMKGV 785
             T+++   M G+
Sbjct: 197 ADTERLSLNMIGM 209


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 570 DAVLLITAPMISSPVFTLSKKCLNLAVLSTFKNVS-NGGINAYKLSSGTRVSVPLVDDEG 394
           D + L+     S    T  +KC     LS    V  +G +       G    + + DDEG
Sbjct: 142 DLIALLKGTDTSHDQPTGEEKCTLEKALSELDGVGEDGDVGVTIEGEGQFEIMEIDDDEG 201

Query: 393 VSSSKEESNKAPAS 352
            SSS++ S K PAS
Sbjct: 202 ESSSRKASPKVPAS 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,904,232
Number of Sequences: 53049
Number of extensions: 678703
Number of successful extensions: 1433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)