Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_L02
         (866 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025743-1|AAH25743.1|  330|Homo sapiens MPP3 protein protein.         31   5.4  
BC021908-1|AAH21908.1|  485|Homo sapiens zinc finger, DHHC-type ...    31   5.4  
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu...    31   7.2  
BC052642-1|AAH52642.1|  136|Homo sapiens GTF3C1 protein protein.       31   7.2  
BC044857-1|AAH44857.1|  978|Homo sapiens GTF3C1 protein protein.       31   7.2  
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T...    31   7.2  

>BC025743-1|AAH25743.1|  330|Homo sapiens MPP3 protein protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 23/60 (38%), Positives = 30/60 (50%)
 Frame = -1

Query: 494 EIGVLMSKRFIQEXEPXLDTPGXESVVPGGGCXRV*QYHVRPPQAFRGHQPSAAAPFPLR 315
           E G+   +R + E  P L+        PGGG     + HV   QA RGHQPS + P PL+
Sbjct: 249 EAGLPFQRRQVLEGRPALEGQAG----PGGG--EPGRPHVVAGQASRGHQPS-SRPHPLQ 301


>BC021908-1|AAH21908.1|  485|Homo sapiens zinc finger, DHHC-type
           containing 1 protein.
          Length = 485

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -3

Query: 459 GXGAXIRYTGXGERSPRRWLXPRLAVPRQASTSVPRTPAKCCSPISPA 316
           G GA I+      R  RR L P  A P  A   +PRTPA C     PA
Sbjct: 393 GRGACIKCERLRPRIRRRGLGPPAAAP--ARRRIPRTPALCTPLALPA 438


>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
            protein.
          Length = 2109

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 332  LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPXPVYLIXAP 454
            L+H  GVL    ++E  +G    GC  +R LR P PV L   P
Sbjct: 2022 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 2064


>BC052642-1|AAH52642.1|  136|Homo sapiens GTF3C1 protein protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 332 LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPXPVYLIXAP 454
           L+H  GVL    ++E  +G    GC  +R LR P PV L   P
Sbjct: 49  LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 91


>BC044857-1|AAH44857.1|  978|Homo sapiens GTF3C1 protein protein.
          Length = 978

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 332  LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPXPVYLIXAP 454
            L+H  GVL    ++E  +G    GC  +R LR P PV L   P
Sbjct: 891  LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 933


>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
            (TFIIIC) alpha chain, partial protein.
          Length = 1857

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 332  LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPXPVYLIXAP 454
            L+H  GVL    ++E  +G    GC  +R LR P PV L   P
Sbjct: 1770 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 1812


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,077,987
Number of Sequences: 237096
Number of extensions: 1823747
Number of successful extensions: 4364
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4364
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)