Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_K24
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 430 HRTPLEAHQNGAETTRGQPAPPAHH 504
           HR     HQ+G  T      PP HH
Sbjct: 329 HRGSSPHHQHGNHTMGPTMGPPHHH 353


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 402 SWSVACKRSTPYALRSPSKWSRNNKRT 482
           +W +AC  S P A    SK  R N  T
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDT 37


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 402 SWSVACKRSTPYALRSPSKWSRNNKRT 482
           +W +AC  S P A    SK  R N  T
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDT 37


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 402 SWSVACKRSTPYALRSPSKWSRNNKRT 482
           +W +AC  S P A    SK  R N  T
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDT 37


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 388 GFQEGRGPSHAKGAHRTPLEAH 453
           GF+ G+G         TP+EAH
Sbjct: 170 GFEPGKGLGKQLQGISTPVEAH 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,176
Number of Sequences: 438
Number of extensions: 4094
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)