Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_K18
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ277365-1|CAC10539.1| 796|Homo sapiens polyglutamine-containin... 112 1e-24
AY278024-1|AAP78945.1| 571|Homo sapiens interferon regulatory f... 109 1e-23
AY278023-1|AAP78944.1| 587|Homo sapiens interferon regulatory f... 109 1e-23
AL160408-2|CAI22768.1| 571|Homo sapiens interferon regulatory f... 109 1e-23
AL160408-1|CAI22767.1| 587|Homo sapiens interferon regulatory f... 109 1e-23
BC039002-1|AAH39002.1| 584|Homo sapiens interferon regulatory f... 103 6e-22
BC038222-1|AAH38222.1| 584|Homo sapiens interferon regulatory f... 103 6e-22
AY278022-1|AAP78943.1| 584|Homo sapiens interferon regulatory f... 103 6e-22
AK223622-1|BAD97342.1| 584|Homo sapiens interferon regulatory f... 103 6e-22
BC078181-1|AAH78181.1| 584|Homo sapiens interferon regulatory f... 102 2e-21
BC071956-1|AAH71956.1| 217|Homo sapiens zinc finger, BED-type c... 33 1.3
BC003536-1|AAH03536.1| 217|Homo sapiens zinc finger, BED-type c... 33 1.3
AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ... 31 3.9
>AJ277365-1|CAC10539.1| 796|Homo sapiens polyglutamine-containing
protein protein.
Length = 796
Score = 112 bits (270), Expect = 1e-24
Identities = 56/92 (60%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGR- 410
+RQ C LCDLPRMPWAM+ +FSE VCRGCVNYEGADRIE V+ETARQLKRAHG FQ+GR
Sbjct: 10 RRQSCYLCDLPRMPWAMIWDFSEPVCRGCVNYEGADRIEFVIETARQLKRAHGCFQDGRS 69
Query: 411 -GPSHAKGAHRTPLEAHQNGAETTRGQPAPPA 503
GP G L A + A A A
Sbjct: 70 PGPPPPVGVKTVALSAKEAAAAAAAAAAAAAA 101
>AY278024-1|AAP78945.1| 571|Homo sapiens interferon regulatory
factor-2 binding protein 2B protein.
Length = 571
Score = 109 bits (262), Expect = 1e-23
Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 222 MSVMQKRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-F 398
++ +RQ C LCDLPRMPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F
Sbjct: 7 VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCF 66
Query: 399 QEGRGPSHA 425
EGR P A
Sbjct: 67 PEGRSPPGA 75
>AY278023-1|AAP78944.1| 587|Homo sapiens interferon regulatory
factor-2 binding protein 2A protein.
Length = 587
Score = 109 bits (262), Expect = 1e-23
Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 222 MSVMQKRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-F 398
++ +RQ C LCDLPRMPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F
Sbjct: 7 VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCF 66
Query: 399 QEGRGPSHA 425
EGR P A
Sbjct: 67 PEGRSPPGA 75
>AL160408-2|CAI22768.1| 571|Homo sapiens interferon regulatory
factor 2 binding protein 2 protein.
Length = 571
Score = 109 bits (262), Expect = 1e-23
Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 222 MSVMQKRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-F 398
++ +RQ C LCDLPRMPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F
Sbjct: 7 VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCF 66
Query: 399 QEGRGPSHA 425
EGR P A
Sbjct: 67 PEGRSPPGA 75
>AL160408-1|CAI22767.1| 587|Homo sapiens interferon regulatory
factor 2 binding protein 2 protein.
Length = 587
Score = 109 bits (262), Expect = 1e-23
Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 222 MSVMQKRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-F 398
++ +RQ C LCDLPRMPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F
Sbjct: 7 VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCF 66
Query: 399 QEGRGPSHA 425
EGR P A
Sbjct: 67 PEGRSPPGA 75
>BC039002-1|AAH39002.1| 584|Homo sapiens interferon regulatory
factor 2 binding protein 1 protein.
Length = 584
Score = 103 bits (248), Expect = 6e-22
Identities = 48/93 (51%), Positives = 60/93 (64%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 416
+RQ C LCDLP+MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H EGR P
Sbjct: 8 RRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSP 67
Query: 417 SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTP 515
H + A +G PP P
Sbjct: 68 GPPALKHPATKDL---AAAAAQGPQLPPPQAQP 97
>BC038222-1|AAH38222.1| 584|Homo sapiens interferon regulatory
factor 2 binding protein 1 protein.
Length = 584
Score = 103 bits (248), Expect = 6e-22
Identities = 48/93 (51%), Positives = 60/93 (64%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 416
+RQ C LCDLP+MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H EGR P
Sbjct: 8 RRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSP 67
Query: 417 SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTP 515
H + A +G PP P
Sbjct: 68 GPPALKHPATKDL---AAAAAQGPQLPPPQAQP 97
>AY278022-1|AAP78943.1| 584|Homo sapiens interferon regulatory
factor-2 binding protein 1 protein.
Length = 584
Score = 103 bits (248), Expect = 6e-22
Identities = 48/93 (51%), Positives = 60/93 (64%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 416
+RQ C LCDLP+MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H EGR P
Sbjct: 8 RRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSP 67
Query: 417 SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTP 515
H + A +G PP P
Sbjct: 68 GPPALKHPATKDL---AAAAAQGPQLPPPQAQP 97
>AK223622-1|BAD97342.1| 584|Homo sapiens interferon regulatory
factor 2 binding protein 1 variant protein.
Length = 584
Score = 103 bits (248), Expect = 6e-22
Identities = 48/93 (51%), Positives = 60/93 (64%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 416
+RQ C LCDLP+MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H EGR P
Sbjct: 8 RRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSP 67
Query: 417 SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTP 515
H + A +G PP P
Sbjct: 68 GPPALKHPATKDP---AAAAAQGPQLPPPQAQP 97
>BC078181-1|AAH78181.1| 584|Homo sapiens interferon regulatory
factor 2 binding protein 1 protein.
Length = 584
Score = 102 bits (244), Expect = 2e-21
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = +3
Query: 237 KRQHCCLCDLPRMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 416
+RQ C LCDLP+MPWA++ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H EGR P
Sbjct: 8 RRQWCYLCDLPKMPWAIVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSP 67
Query: 417 SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTP 515
H + A +G PP P
Sbjct: 68 GPPALKHPATKDL---AAAAAQGPQLPPPQAQP 97
>BC071956-1|AAH71956.1| 217|Homo sapiens zinc finger, BED-type
containing 2 protein.
Length = 217
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 372 RQLKRAHGFQEGRGP--SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHPR 545
RQ+ R G G H K HR LE +G R P P PT G + R
Sbjct: 82 RQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPT-GIEGNWGR 140
Query: 546 PTASAGLLAEYGSRRDEHEGRR 611
G +A + S+R++ RR
Sbjct: 141 LLEQVGTMALWASQREKEVLRR 162
>BC003536-1|AAH03536.1| 217|Homo sapiens zinc finger, BED-type
containing 2 protein.
Length = 217
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 372 RQLKRAHGFQEGRGP--SHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHPR 545
RQ+ R G G H K HR LE +G R P P PT G + R
Sbjct: 82 RQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPT-GIEGNWGR 140
Query: 546 PTASAGLLAEYGSRRDEHEGRR 611
G +A + S+R++ RR
Sbjct: 141 LLEQVGTMALWASQREKEVLRR 162
>AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3
protein.
Length = 1093
Score = 31.5 bits (68), Expect = 3.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 357 VLETARQLKRAHGFQEGRGPSHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTPT 518
+ ET KR +EG+GP GA +P + G E GQ PP +P+
Sbjct: 576 MFETEADEKREMALEEGKGP----GAEDSPSKEPSPGQELPPGQDLPPNKDSPS 625
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,348,908
Number of Sequences: 237096
Number of extensions: 2286549
Number of successful extensions: 8041
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8025
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -