Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_K11
         (827 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein p...    32   2.9  
AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens ...    32   2.9  
BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.      31   6.7  
AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens ...    31   6.7  
AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.              31   6.7  
AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.              31   6.7  
AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.              31   6.7  
BX640774-1|CAE45872.1|  532|Homo sapiens hypothetical protein pr...    30   8.9  
AL357372-4|CAI41351.1|  179|Homo sapiens myeloid/lymphoid or mix...    30   8.9  
AL161799-6|CAI39668.1|  179|Homo sapiens myeloid/lymphoid or mix...    30   8.9  

>BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein
           protein.
          Length = 541

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIFHRGNR---DVITRLTYAAFTFLWR 316
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
           Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
           ).
          Length = 541

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIFHRGNR---DVITRLTYAAFTFLWR 316
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 379
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 16  CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 49


>AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23293 fis, clone HEP10514. ).
          Length = 579

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 379
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 379
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 379
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 480 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 379
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>BX640774-1|CAE45872.1|  532|Homo sapiens hypothetical protein
           protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 112 HFNTCPTLTSTYNRH*ITQRNKNIVSAPGKRSPTKSS 2
           H   CPT TS YN + +     N+VS  G  +P  SS
Sbjct: 91  HDGACPT-TSIYNSNDVAVSFPNVVSGSGSSTPVSSS 126


>AL357372-4|CAI41351.1|  179|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 112 HFNTCPTLTSTYNRH*ITQRNKNIVSAPGKRSPTKSS 2
           H   CPT TS YN + +     N+VS  G  +P  SS
Sbjct: 121 HDGACPT-TSIYNSNDVAVSFPNVVSGSGSSTPVSSS 156


>AL161799-6|CAI39668.1|  179|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 112 HFNTCPTLTSTYNRH*ITQRNKNIVSAPGKRSPTKSS 2
           H   CPT TS YN + +     N+VS  G  +P  SS
Sbjct: 121 HDGACPT-TSIYNSNDVAVSFPNVVSGSGSSTPVSSS 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,094,074
Number of Sequences: 237096
Number of extensions: 2330015
Number of successful extensions: 12505
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12505
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)