Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_K01
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.1  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.1  
Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z82282-10|CAB05277.2|  600|Caenorhabditis elegans Hypothetical p...    28   9.5  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    28   9.5  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 225 GTVSSTFDHPFSTPVLRSYWHRNQ 296
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 225 GTVSSTFDHPFSTPVLRSYWHRNQ 296
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 228  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 392
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 393  SFRP*PQNTSHS 428
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 228  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 392
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 393  SFRP*PQNTSHS 428
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 256 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 360
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 228  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 392
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 393  SFRP*PQNTSHS 428
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical
           protein T23D8.9b protein.
          Length = 239

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
 Frame = +1

Query: 526 MHQATLPXRSRLHQPDHXIPDSIHQPPQT*H------PFPSIPXTPYXKEFAP---GLKP 678
           MH    P R       H +P  + Q P T H      P P +P  PY  +  P    ++P
Sbjct: 1   MHSTGEPQRGPAGPYHHPMPYHVDQIPTTSHPSWHQAPHPGLPTPPYHPQQHPNYISMQP 60

Query: 679 PXSSXAPSXYLTPSSL 726
           P S       +TP +L
Sbjct: 61  PPSQ---QQQMTPQAL 73


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
 Frame = +1

Query: 526 MHQATLPXRSRLHQPDHXIPDSIHQPPQT*H------PFPSIPXTPYXKEFAP---GLKP 678
           MH    P R       H +P  + Q P T H      P P +P  PY  +  P    ++P
Sbjct: 1   MHSTGEPQRGPAGPYHHPMPYHVDQIPTTSHPSWHQAPHPGLPTPPYHPQQHPNYISMQP 60

Query: 679 PXSSXAPSXYLTPSSL 726
           P S       +TP +L
Sbjct: 61  PPSQ---QQQMTPQAL 73


>Z82282-10|CAB05277.2|  600|Caenorhabditis elegans Hypothetical
           protein T07G12.6 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 531 SSHPPLXISATSTRSSXPRFHTPTTP 608
           S+ PP+ +S T      PRF TP  P
Sbjct: 149 SNKPPILLSTTLANVGVPRFSTPIKP 174


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 565 QPDHXIPDSIHQP-PQT*HPFPSIPXTPYXKEFAPGLKPPXSSXAPSXYLTPS 720
           QP    P     P PQ   P P+ P  PY +   P   PP +S   +    P+
Sbjct: 44  QPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,751,621
Number of Sequences: 27780
Number of extensions: 307114
Number of successful extensions: 920
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)