Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_K01
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   8.1  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   8.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 419 QSQLTFVGLLLTSQLKESMCWPPLHPLALL 508
           QS+ T   +L    +   +CW P H   LL
Sbjct: 253 QSRKTITRMLSAVVITFFICWAPFHVQRLL 282


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 413 KYQSQLTFVGLLLTSQLKESMCWPPLHPLALLS 511
           K  +Q   + +L+   +   +CW P H   LL+
Sbjct: 276 KSAAQRNVIRMLVAVVVAFFICWAPFHAQRLLA 308


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 473 MCWPPLHPLALLSAVSPLCIKP 538
           +CW P   + L+ A    CI P
Sbjct: 20  LCWLPFFTMYLVRAFCRNCIHP 41


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 473 MCWPPLHPLALLSAVSPLCIKP 538
           +CW P   + L+ A    CI P
Sbjct: 468 LCWLPFFTMYLVRAFCRNCIHP 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,079
Number of Sequences: 438
Number of extensions: 3530
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)