Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_J21
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 33 1.4
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 33 1.4
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 33 1.4
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 33 1.4
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 33 1.4
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 33 1.8
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 33 1.8
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 33 1.8
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 33 1.8
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 33 1.8
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 33 1.8
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 33 1.8
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 33 1.8
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 32 3.2
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 32 3.2
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 32 3.2
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 32 3.2
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 32 3.2
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 32 3.2
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 32 3.2
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 32 3.2
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 32 3.2
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 31 4.2
BC110597-1|AAI10598.1| 411|Homo sapiens ligand-gated ion channe... 31 4.2
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 31 4.2
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 31 4.2
AK122638-1|BAC85499.1| 266|Homo sapiens yte protein of 76kDa) (... 31 4.2
AF512521-1|AAO20969.1| 411|Homo sapiens ligand-gated ion channe... 31 4.2
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 31 4.2
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.5
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 31 5.5
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.5
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 5.5
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 5.5
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 5.5
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 5.5
AB223030-1|BAE19924.1| 411|Homo sapiens ligand-gated ion-channe... 31 5.5
AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic acet... 31 7.3
AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic acet... 31 7.3
AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine... 31 7.3
AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine... 31 7.3
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 30 9.7
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 30 9.7
X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine recept... 30 9.7
U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B... 30 9.7
U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2 ... 30 9.7
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 30 9.7
CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein. 30 9.7
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 30 9.7
BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha... 30 9.7
AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2... 30 9.7
AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2... 30 9.7
AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha ... 30 9.7
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPN 514
P ++W+PD+VL N A GD+ + +A + NG ++W + M + +P
Sbjct: 111 PADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPF 167
Query: 515 RHADLARSSFGS 550
H + + FGS
Sbjct: 168 DHQNCS-LKFGS 178
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPN 514
P ++W+PD+VL N A GD+ + +A + NG ++W + M + +P
Sbjct: 111 PADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPF 167
Query: 515 RHADLARSSFGS 550
H + + FGS
Sbjct: 168 DHQNCS-LKFGS 178
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPN 514
P ++W+PD+VL N A GD+ + +A + NG ++W + M + +P
Sbjct: 111 PADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPF 167
Query: 515 RHADLARSSFGS 550
H + + FGS
Sbjct: 168 DHQNCS-LKFGS 178
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL N T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNDGTYEVSVYTNLIVRSNGSVLWL 143
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPN 514
P ++W+PD+VL N A GD+ + +A + NG ++W + M + +P
Sbjct: 111 PADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPF 167
Query: 515 RHADLARSSFGS 550
H + + FGS
Sbjct: 168 DHQNCS-LKFGS 178
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 71 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 126
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 317 GNGAAALGWCPRXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWI 460
G G A P ++W+PD+VL N A GD+ + +A + G V+WI
Sbjct: 99 GYGGAEFMRVPAQKIWKPDIVLYNNA---VGDFQVTTKTKALLKYTGEVTWI 147
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 511
P LW PD+VL NA G + V +NG+V W + +M + +P
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFP 161
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 73 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 119
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 323 GAAALGWCPRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
G A P ++W+PD+VL NA D +A + G V+WI
Sbjct: 98 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 144
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 327
+++E E T+ ++ W D RL WNA E+G
Sbjct: 65 SLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC110597-1|AAI10598.1| 411|Homo sapiens ligand-gated ion channel,
zinc activated 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNRHAD 526
P LW P + +L A D + +ARV +G V L T + +L ++P H++
Sbjct: 110 PWESLWTPRLTILEALWVDWRDQSPQARVDQDGHVKLNLALTTETNCNFELLHFPRDHSN 169
Query: 527 LARSSF 544
+ S +
Sbjct: 170 CSLSFY 175
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 327
+++E E T+ ++ W D RL WNA E+G
Sbjct: 65 SLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 327
+++E E T+ ++ W D RL WNA E+G
Sbjct: 65 SLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AK122638-1|BAC85499.1| 266|Homo sapiens yte protein of 76kDa)
(LCP2). protein.
Length = 266
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNRHAD 526
P LW P + +L A D + +ARV +G V L T + +L ++P H++
Sbjct: 111 PWESLWTPRLTILEALWVDWRDQSPQARVDQDGHVKLNLALTTETNCNFELLHFPRDHSN 170
Query: 527 LARSSF 544
+ S +
Sbjct: 171 CSLSFY 176
>AF512521-1|AAO20969.1| 411|Homo sapiens ligand-gated ion channel
subunit protein.
Length = 411
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNRHAD 526
P LW P + +L A D + +ARV +G V L T + +L ++P H++
Sbjct: 110 PWESLWTPRLTILEALWVDWRDQSPQARVDQDGHVKLNLALTTETNCNFELLHFPRDHSN 169
Query: 527 LARSSF 544
+ S +
Sbjct: 170 CSLSFY 175
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 327
+++E E T+ ++ W D RL WNA E+G
Sbjct: 65 SLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 59 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 97
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 460
P R+W PD+VL NA T V +NGSV W+
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>AB223030-1|BAE19924.1| 411|Homo sapiens ligand-gated ion-channel
receptor L2 protein.
Length = 411
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNRHAD 526
P LW P + +L A D + +ARV +G V L T + +L ++P H++
Sbjct: 110 PWESLWTPRLTILEALWVDWRDQSPQARVDQDGHVKLNLALATETNCNFELLHFPRDHSN 169
Query: 527 LARSSF 544
+ S +
Sbjct: 170 CSLSFY 175
>AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic
acetylcholine receptor subunit4 protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL N A A G + + ++G+V W
Sbjct: 107 PSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic
acetylcholine alpha10 subunit protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL N A A G + + ++G+V W
Sbjct: 107 PSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL N A A G + + ++G+V W
Sbjct: 107 PSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL N A A G + + ++G+V W
Sbjct: 107 PSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 89 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 126
>X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine receptor
protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B
subunit protein.
Length = 360
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 360
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 PRXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 457
P +WRPD+VL NA A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha 2
protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2
subunit B protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2
subunit A protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
>AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
+W+PD+ N D R+S NG V + RL ++ M L N+P
Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,898,499
Number of Sequences: 237096
Number of extensions: 2469286
Number of successful extensions: 6362
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6333
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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