Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_J14
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 4e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 39 5e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 38 1e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 6e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 34 0.001
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 34 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.002
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 31 0.014
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.22
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 4e-07
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Frame = +1
Query: 148 MIDSLLATYDRDSPPDSKIVVNLTLHLX-------HANIRESESTVRIQADLQMNXIDXR 306
+ D LL+ Y+R P LT+ L N++ T + + + N D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWN--DYK 94
Query: 307 LSWNAXXWGCXTWL-VSXERLWRPDVVLLNAAATXXGDYAL----RARVSXTGSVSWIKR 471
L WN +G L V E +W PD+VL N A G+Y + +A + TG VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 472 LDIXTPXPMRLDXXPXXXQXC 534
+ + ++ P Q C
Sbjct: 152 AIYKSSCEINVEYFPFDEQSC 172
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Frame = +1
Query: 121 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTL-------HLXHANIRESESTVRIQAD 279
C + D LL+ Y++ P + LT+ L N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 280 LQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLL-NAAATXXGDYALRARVSXTGS 453
++ + D +L W+ +G L V + +WRPD+VL NA A +A ++ TG
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 454 VSWIKRLDIXTPXPMRLDXXPXXXQXC 534
V W + + ++ P Q C
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Frame = +1
Query: 121 CENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLXHA---NIRESESTVRIQAD 279
C + D LL+ Y+R P S +VV L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 280 LQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAAATXXGDYAL-RARVSXTGS 453
L+ D + W+ +G T L V E +W PD+VL N A G + +A + TG
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 454 VSWIKRLDIXTPXPMRLDXXPXXXQXC 534
V W + + + P Q C
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +1
Query: 148 MIDSLLATYDRDSPP----DSKIVVNLTLHLXH---ANIRESESTVRIQADLQMNXIDXR 306
+ D LL+ Y+R P ++ V + L L N++ T + + + N D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWN--DYK 81
Query: 307 LSWNAXXWG-CXTWLVSXERLWRPDVVLLNAAATXXGDYAL----RARVSXTGSVSW 462
L WN +G T V E +W PD+VL N A G+Y + +A + TG V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Frame = +1
Query: 202 IVVNLTLHLXHANIRESESTVRIQADLQMNXIDXRLSWNAXXW-GCXTWLVSXERLWRPD 378
+V L+LH ++ E + + D L WNA + G V R+WRPD
Sbjct: 33 VVFGLSLHHI-IDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 379 VVLLNAAATXXGDYALRAR--VSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
+L N A + VS TG V W+ + + ++ P Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 41.1 bits (92), Expect = 1e-05
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
Frame = +1
Query: 127 NATSLSLMIDSLLATYDRDSPPD-----SKIVVNLTLHLXHANIRESESTVRIQADLQMN 291
N +++S ++D+LL YD PD + + V++ + I E + T + + +
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSM-GPISEVDMTYSMDCYFRQS 60
Query: 292 XIDXRLSWNAXXWGCXTWLVSXERLWRPDVVLLNAAATXXGDYALR---ARVSXTGSVSW 462
+D RL++ + R+W+PD N + R+ G V +
Sbjct: 61 WVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 120
Query: 463 IKRLDIXTPXPMRLDXXPXXXQXC 534
RL I PM L+ P Q C
Sbjct: 121 SSRLTIKAGCPMNLENFPMDTQRC 144
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + M + P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + M + P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.9 bits (89), Expect = 3e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.9 bits (89), Expect = 3e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXX 411
++ E + A L++ +D L WN +G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 412 GDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
G Y V+ GS ++ + + + P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 37.9 bits (84), Expect = 1e-04
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Frame = +1
Query: 136 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLXHAN-IRESESTVRIQADLQMNXID 300
++++++++LL Y+ + P + VV + + + E + + + + D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 301 XRLSWNAXXWGCXTWLVSXERLWRPDVVLLNAAATXXGDYALR---ARVSXTGSVSWIKR 471
RLS+ + ER+WRPD N + + R+S G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 472 LDIXTPXPMRLDXXPXXXQXC 534
L I PM L P Q C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Frame = +1
Query: 199 KIVVNLTLHLXHA-NIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWR 372
K+ VN L N+ E ++ L+ D +L W+ +G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 373 PDVVLLNAAATXXGDYALRAR----VSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
PD+VL N A G+Y +R + + G V W+ + + + P Q C
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.1 bits (82), Expect = 2e-04
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 121 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLXHANIRESESTVRIQADLQ 285
C++ TS S + L YDRD P+ K ++ L + H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 286 MNXIDXRLSWNAXXWGCXTWL-VSXERLWRPDVVL 387
+ L+W + + + V +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.1 bits (82), Expect = 2e-04
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = +1
Query: 199 KIVVNLTL-HLXHANIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWR 372
++ + L L L N++ T + ++ + D +L W +G L V + +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 373 PDVVLL-NAAATXXGDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
PD+VL NA A +A + G V W + + ++ P Q C
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTC 167
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.9 bits (79), Expect = 5e-04
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Frame = +1
Query: 199 KIVVNLTL-HLXHANIRESESTVRIQADLQMNXIDXRLSWNAXXWGCXTWL-VSXERLWR 372
++ + L L L N++ T + ++ + D +L W +G L V + +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 373 PDVVLLNAAATXXGDYAL----RARVSXTGSVSWIKRLDIXTPXPMRLDXXPXXXQXC 534
PD+VL N A G+Y + +A V +G V W + + ++ P Q C
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTC 167
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.5 bits (78), Expect = 6e-04
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Frame = +1
Query: 127 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LXHANIRESESTVRIQADLQMNX 294
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + +
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 295 IDXRLSWNAXXWGCXTWLVSXE---RLWRPDVVLLNAA------ATXXGDYALRARVSXT 447
D RL++ G T V E +W PD +N AT ++ R+ +
Sbjct: 68 TDPRLAFKKRT-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 448 GSVSWIKRLDIXTPXPMRLDXXPXXXQXCXXTCE 549
GS++ RL I PM L P Q C E
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIE 157
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.001
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Frame = +1
Query: 127 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LXHANIRESESTVRIQADLQMNX 294
N ++S ++DS +YD+ P+ + V +T++ L +++ E + +
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 295 IDXRLSWNAXXWGCXTWLVSXE---RLWRPDVVLLNAA------ATXXGDYALRARVSXT 447
D RL++ G T V E +W PD +N AT ++ R+ +
Sbjct: 68 TDPRLAFKKRT-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 448 GSVSWIKRLDIXTPXPMRLDXXPXXXQXCXXTCE 549
GS++ RL I PM L P Q C E
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIE 157
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.3 bits (75), Expect = 0.001
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 7/136 (5%)
Frame = +1
Query: 148 MIDSLLATYDRDSPP----DSKIVVNLTLHLXHA-NIRESESTVRIQADLQMNXIDXRLS 312
+++ LL TY+ P +V++ L L ++ E + L++ D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 313 WNAXXWGCXTWL-VSXERLWRPDVVLLNAA-ATXXGDYALRARVSXTGSVSWIKRLDIXT 486
WN +G L + RLW+PDV++ N+A G Y V G+ ++ +
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKS 146
Query: 487 PXPMRLDXXPXXXQXC 534
+ + P Q C
Sbjct: 147 TCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 11/140 (7%)
Frame = +1
Query: 148 MIDSLLATYDRDSPP------DSKIVVNLTLHLXH-ANIRESESTVRIQADLQMNXIDXR 306
++D++L YD P D +V + L + A I + + +Q + +D R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 307 LSWNAXXWGCX-TWLVSXERLWRPDVVLLNAAATXXGDYALR---ARVSXTGSVSWIKRL 474
L +N L R+W PD+ N + + R+ GSV + R+
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 475 DIXTPXPMRLDXXPXXXQXC 534
+ PM L P Q C
Sbjct: 155 SLTLSCPMNLKLYPLDRQVC 174
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.014
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 11/140 (7%)
Frame = +1
Query: 148 MIDSLLATYDRDSPP------DSKIVVNLTLHLXH-ANIRESESTVRIQADLQMNXIDXR 306
++D++L YD P D VV + + + + I + +Q + +D R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 307 LSWNAXXWGCX-TWLVSXERLWRPDVVLLNAAATXXGDYALR---ARVSXTGSVSWIKRL 474
L +N L R+W PD+ N + + R+ GSV + R+
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 475 DIXTPXPMRLDXXPXXXQXC 534
+ PM L P Q C
Sbjct: 155 SLTLSCPMNLKLYPLDRQVC 174
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.22
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Frame = +1
Query: 358 ERLWRPDVVLLNAA------ATXXGDYALRARVSXTGSVSWIKRLDIXTPXPMRLDXXPX 519
+ +W PD +N AT ++ R+ +GS++ RL I PM L P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 520 XXQXCXXTCE 549
Q C E
Sbjct: 87 DRQLCHIEIE 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,624
Number of Sequences: 438
Number of extensions: 2404
Number of successful extensions: 29
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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