Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_J06
(871 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 6e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 6e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 7e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.001
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 33 0.003
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.005
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 30 0.024
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 30 0.024
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 30 0.024
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 30 0.024
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.52
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 2.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 355 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
QTC KFGS N D + +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.8 bits (106), Expect = 3e-07
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
V S+ +WRPD+VL N A A +A + + G V W + + + +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 523 QTCTFKFGSRMHNSDXMD 576
QTC KFGS ++ +D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.4 bits (105), Expect = 3e-07
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPN 516
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 517 DMQTCTFKFGSRMHNSDXMDFVIDKRIYXM 606
D C FGS +H+ + ++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.4 bits (105), Expect = 3e-07
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
V S+ +WRPD+VL N A A +A ++ G V W + + + +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 523 QTCTFKFGSRMHNSDXMD 576
QTC KFGS ++ +D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 45.6 bits (103), Expect = 6e-07
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 328 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 495
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 496 XXDNWPNDMQTCTFKFGSRMHNSDXMD 576
+ +P D Q+C KFGS +N +D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMXXDNWP 513
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ + +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 514 NDMQTCTFKFGSRMHNSDXMD 576
D+QTC K GS ++ +D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.0 bits (99), Expect = 2e-06
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 322 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 495
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 496 XXDNWPNDMQTCTFKFGSRMHNSDXMD 576
+P D QTC KFGS ++ +D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V+++GS ++ + M +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V+++GS ++ + M +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 42.3 bits (95), Expect = 6e-06
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 328 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 495
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 496 XXDNWPNDMQTCTFKFGSRMHNSDXMD 576
+ +P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.9 bits (94), Expect = 7e-06
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
+ RLW+PDV++ N+A G Y V NNG+ ++ + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 523 QTCTFKFGSRMHNSDXMD 576
Q C KFGS ++ +D
Sbjct: 160 QRCEMKFGSWTYDGFQLD 177
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 523 QTCTFKFGSRMHNSDXMDFVI 585
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGGMG 329
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 355 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMXXDNWPNDMQ 525
ER+WRPD N + + R+S +G + + RL I M N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 526 TCTFKFGS 549
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.5 bits (83), Expect = 2e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +1
Query: 358 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMXXDNWPNDMQT 528
R+W+PD N + T R+ +G V + RL I M +N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 529 CTFKFGS 549
C +FGS
Sbjct: 144 CPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMXXDNWPND 519
V R+WRPD +L N A + V S+ G V W+ + + + +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 520 MQTCTFKFGS 549
Q C K+ S
Sbjct: 142 EQRCVLKWAS 151
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 361 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMXXDNWPNDMQTC 531
+WRPD NA T + ++ + ++ ++ ++ +L + +M +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 532 TFKFGSRMHNSDXMDFV 582
+ S H + + F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 352 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMXXDNWPNDM 522
+E++W PD N + D R R+S +GSV++ R + M +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 523 QTCTFKFGS 549
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 355 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMXXDNWPNDMQ 525
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 526 TCTFKFGSRMHNSDXMDFVID 588
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 343 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMXXDNWP 513
L + R+W PD+ N + + R+ NGSV + R+ ++ M +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 514 NDMQTCTFKFGSRMHNSDXMDFV 582
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 343 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMXXDNWP 513
L + R+W PD+ N + + R+ NGSV + R+ ++ M +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 514 NDMQTCTFKFGSRMHNSDXMDFV 582
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 328 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 480
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 481 TPISMXXDNWPNDMQTCTFKFGS 549
M +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 328 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 480
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 481 TPISMXXDNWPNDMQTCTFKFGS 549
M +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.024
Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRESPPEXQNRSQPDPAFETC*HS*VRV-HRCGYWQIFK 282
C++ TS S + L YDR+ PE +N ++ D ++ H + + K
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 283 *IGSTND*VGTQGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGS 450
+ + E+ ++ V S +W PD+V+ ++ + D ++ V N+G+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGT 146
Query: 451 VSWIKRLDISTPISMXXDNWPNDMQTCTFKFGSRMHNSD 567
+ + + WP D+ CT S H S+
Sbjct: 147 ILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSN 185
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 328 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 480
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 481 TPISMXXDNWPNDMQTCTFKFGS 549
M +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 361 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMXXDNWPNDMQTC 531
+W P V + N ++A T + + + +G V RL + + + +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 532 TFKFGSRMHN 561
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.8 bits (54), Expect = 0.52
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 355 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMXXDNWPND 519
+ LW+PD LNA + AL + S+ N +V + R+ M +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 520 MQTC 531
+Q C
Sbjct: 127 IQIC 130
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 354 RGHQPSAAAPFPLRSNSVVCRSNSFEDLPVSAAVDSDSRMLACLKCRVRLTTI 196
RG+QPS + RS V R+ S + +S +DS + + R R T +
Sbjct: 347 RGNQPSTSECGEFRSVVVQKRNGSMIECNISPRSSADSCQVGIMAQRHRDTIV 399
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 102 SYSSK*GEYGNKNNISRQTFYDN*SIEAI 16
+Y S Y N NN +++ +Y+ IE I
Sbjct: 88 NYISNISNYNNNNNYNKKLYYNINYIEQI 116
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 102 SYSSK*GEYGNKNNISRQTFYDN*SIEAI 16
+Y S Y N NN +++ +Y+ IE I
Sbjct: 326 NYISNISNYNNNNNYNKKLYYNINYIEQI 354
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 6.4
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMXXDNWPNDMQTCTFKFGSRMHNSDXMDFV 582
R+ NG+V+++ R + + +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 6.4
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMXXDNWPNDMQTCTFKFGSRMHNSDXMDFV 582
R+ NG+V+++ R + + +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 6.4
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMXXDNWPNDMQTCTFKFGSRMHNSDXMDFV 582
R+ NG+V+++ R + + +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 6.4
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 430 RVSNNGSVSWIKRLDISTPISMXXDNWPNDMQTCTFKFGSRMHNSDXMDFV 582
R+ NG+V+++ R + + +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,123
Number of Sequences: 438
Number of extensions: 4664
Number of successful extensions: 76
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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