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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_J05
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    33   0.002
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    33   0.003
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    31   0.017
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    29   0.040
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    28   0.12 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    27   0.16 
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    27   0.16 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    27   0.16 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    27   0.21 
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    27   0.28 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    26   0.37 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    26   0.37 
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    26   0.50 
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    26   0.50 
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.65 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.65 
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    24   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.5  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    24   2.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   2.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.1  

>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
 Frame = +1

Query: 160 RTIGTPPPNSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLGWNAGGVGLQHL 336
           R  G    +   +V + L +R  A I + +    +Q   +  W+D+RL +N  G  L++L
Sbjct: 48  RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107

Query: 337 AGVLGTLV---EA*RGTAKRGCNHRRGLRSPRPMYLITAPSPXIK---RLDISTPISMQL 498
                + V   +      K G  H   +  P  +Y+   P+  +    R+ ++    M L
Sbjct: 108 TLTDASRVWMPDLFFSNEKEG--HFHNIIMPN-VYIRIFPNGSVLYSIRISLTLSCPMNL 164

Query: 499 DNWPNDMQTCTFKXGSRMXNSDEMDFV 579
             +P D Q C+ +  S    +D++ F+
Sbjct: 165 KLYPLDRQVCSLRMASYGWTTDDLVFL 191


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
 Frame = +1

Query: 232 IRESESTVRIQADLQMNWIDKRLGWNAGGVGLQHLAGVLGTLVEA*RGTAKRGCNHRRGL 411
           I E + T  +    + +W+D+RL +  G   L     +L  + +          ++   +
Sbjct: 44  ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103

Query: 412 RSPRPMYLITAPSPXI--KRLDISTPISMQLDNWPNDMQTCTFKXGS 546
            SP     +      +   RL I     M L+N+P D Q C  + GS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 30.7 bits (66), Expect = 0.017
 Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
 Frame = +1

Query: 160 RTIGTPPPNSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLGWNAGGVGLQHL 336
           R  G    +   VV + + +R  + I +      +Q   +  W+D+RL +N  G  L++L
Sbjct: 48  RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107

Query: 337 AGVLGTLV---EA*RGTAKRGCNHRRGLRSPRPMYLITAPSPXIK---RLDISTPISMQL 498
                + V   +      K G  H   +  P  +Y+   P+  +    R+ ++    M L
Sbjct: 108 TLTDASRVWMPDLFFSNEKEG--HFHNIIMPN-VYIRIFPNGSVLYSIRISLTLSCPMNL 164

Query: 499 DNWPNDMQTCTFKXGSRMXNSDEMDFV 579
             +P D Q C+ +  S    +D++ F+
Sbjct: 165 KLYPLDRQVCSLRMASYGWTTDDLVFL 191


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 0.040
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = +1

Query: 505 WPNDMQTCTFKXGSRMXNSDEMDFVIDXR-----IYSMFESGAWDV 627
           +P D QTC  K GS   N D++   +        +   ++SG WD+
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
 Frame = +2

Query: 299 WVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           W   Q +W      G     +  +++W+PD+VL N A
Sbjct: 83  WTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 119


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 323 GCSTWLVSSERLWRPDVVLLNAA 391
           G  T  V SE +W PD+VL N A
Sbjct: 91  GVDTLHVPSEHIWLPDIVLYNNA 113


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 341 VSSERLWRPDVVLLNAA 391
           V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121



 Score = 25.0 bits (52), Expect = 0.86
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 487 SMQLDNWPNDMQTCTFKXGSRMXNSDEMD 573
           S+ ++ +P D+QTC  K GS   +  ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182



 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 320 TPPAFQPSRLSIQFI*RSACIRTVDSDSRML 228
           +PPAF  SR   +      C+R +   ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 341 VSSERLWRPDVVLLNAA 391
           V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121



 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 320 TPPAFQPSRLSIQFI*RSACIRTVDSDSRML 228
           +PPAF  SR   +      C+R +   ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 341 VSSERLWRPDVVLLNAA 391
           V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 317 EWGCSTWL-VSSERLWRPDVVLLNAA 391
           E+G  T L V SE +W PD+VL N A
Sbjct: 88  EYGGVTELYVPSEHIWLPDIVLYNNA 113


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +1

Query: 175 PPPNSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLGWNA 312
           P   +   ++  L ++H N+ E   TV     L++ W    L W +
Sbjct: 54  PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 463 RLDISTPISMQLDNWPNDMQTCTFKXGS 546
           RL I     M+L N+P D Q+C    GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182



 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 350 ERLWRPDVVLLN 385
           ER+WRPD    N
Sbjct: 115 ERIWRPDTYFYN 126


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 323 GCSTWLVSSERLWRPDVVLLNAA 391
           G     V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +1

Query: 151 SSQRTIGTPPPNSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLGWNAGGV 321
           SS  T+  P  N    + V   + L+   ++ E    +   A L++ W+D  L WN    
Sbjct: 64  SSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123

Query: 322 G 324
           G
Sbjct: 124 G 124



 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 110 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +1

Query: 151 SSQRTIGTPPPNSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLGWNAGGV 321
           SS  T+  P  N    + V   + L+   ++ E    +   A L++ W+D  L WN    
Sbjct: 64  SSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123

Query: 322 G 324
           G
Sbjct: 124 G 124



 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 110 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
 Frame = +2

Query: 296 DWVGTQGEW------GCSTWLVSSERLWRPDVVLLNAA 391
           +WV    +W      G     ++  +LW+PD+++ N+A
Sbjct: 42  EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 229 NIRESESTVRIQADLQMNWIDKRLGWNAGGVG 324
           ++ E    +   A L++ W+D  L WN    G
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 341 VSSERLWRPDVVLLNAA 391
           +   RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 341 VSSERLWRPDVVLLNAA 391
           V   R+WRPD +L N A
Sbjct: 82  VPYNRVWRPDTILYNNA 98


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 442 PLLDTSGAESVVPGGGCSRV*QYHVRPPQAFRGHQPSAA 326
           PL   S  ES   G   S    +HV PP    GH  S+A
Sbjct: 489 PLGSVSSTESTCSGEVASLTEYHHVAPPS---GHHASSA 524


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/41 (19%), Positives = 22/41 (53%)
 Frame = +1

Query: 457 IKRLDISTPISMQLDNWPNDMQTCTFKXGSRMXNSDEMDFV 579
           + +L +    +M+ +++P+D Q C+    S    + ++ F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 463 RLDISTPISMQLDNWPNDMQTCTFKXGSRMXNSDEMDFVID 585
           +L +    +M    +P+D Q C  +  S    +DEM F  D
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 405 GTTLSAPDVSNNGSVSXHKALGH 473
           G    A + +NNG +  H  LGH
Sbjct: 258 GNGNGASNNNNNGDMFCHTGLGH 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,710
Number of Sequences: 438
Number of extensions: 4686
Number of successful extensions: 54
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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