Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_J04
(874 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 41 1e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 2e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 9e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.032
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.30
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 8.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 8.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.5
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAXATTGGALRSPRPVY---L 431
++ +W D +L W E+G L V S+ +WRPD+VL NA L + VY L
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGL 140
Query: 432 ITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
+ P + + S + +P D QTC GS + +DL
Sbjct: 141 VVWQPPAVYKSSCSIDVEF----FPYDVQTCVLKLGSWTYDGFKVDL 183
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + M + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHDGSCLYVP-PGIFK----STCKMDIAWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.8 bits (101), Expect = 1e-06
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAXATTGGALRSPRPVY---L 431
++ +W D +L W E+G L V S+ +WRPD+VL NA L + +Y L
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 432 ITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
+ P I + + + + +P D QTC GS + +DL
Sbjct: 141 VEWKPPAIYK----SSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDL 183
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + M + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHDGSCLYVP-PGIFK----STCKMDVAWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +3
Query: 228 IRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAXATTGGAL 407
I E + T + + +W+D+RL++ G+ + R+W+PD N + +
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 408 RSPRPVYLITVPSPGI--XRLDISTPIXMQLXNWPNDXQTCTFXXGS 542
SP + + RL I M L N+P D Q C GS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.6 bits (98), Expect = 2e-06
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAXATTGG 401
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL N G
Sbjct: 61 NLKDQILTTNV--WLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYG 118
Query: 402 ALRSPRPVYLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
+ + T + + + +P D QTC GS + +DL
Sbjct: 119 VTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDL 175
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHDGSCLYVP-PGIFK----STCKIDIAWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHDGSCLYVP-PGIFK----STCKIDITWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHNGSCLYVP-PGIFK----STCKIDITWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + +P D Q C GS + + +
Sbjct: 85 GTYQTSVVVTHDGSCLYVP-PGI----FGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQV 139
Query: 567 DL 572
DL
Sbjct: 140 DL 141
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + + +P D Q C GS + + +
Sbjct: 153 GTYQTNVVVTHNGSCLYVP-PGIFK----STCKIDITWFPFDDQHCDMKFGSWTYDGNQV 207
Query: 567 DL 572
DL
Sbjct: 208 DL 209
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN-AXATTG 398
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 399 GALRSPRPV----YLITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
G ++ V + VP PGI + + + + +P D Q C GS + + +
Sbjct: 153 GTYQTNVVVTHNGSCLYVP-PGIFK----STCKIDITWFPFDDQHCDMKFGSWTYDGNQV 207
Query: 567 DL 572
DL
Sbjct: 208 DL 209
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.3 bits (95), Expect = 6e-06
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +3
Query: 213 LRHANIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAXA 389
++H N+ E TV L++ W L+W + E+ + V S +W PD+V +++
Sbjct: 68 IQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV-MHSVT 126
Query: 390 TTGGALRSPRPVYLITVPSPGIXRLDIS--TPIXMQLXN-WPNDXQTCTFXXGSRMHXXD 560
+ G L P V I S I + + TP+ WP D CT S H +
Sbjct: 127 SVGIDLEMP-SVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSN 185
Query: 561 XMDL 572
+ L
Sbjct: 186 EIKL 189
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.1 bits (92), Expect = 1e-05
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 270 QMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAXATTGGALRSPRPVYLITVPSP 449
+ +W D RLS+ + ER+WRPD N + + P + I+
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 450 GIX--RLDISTPIXMQLXNWPNDXQTCTFXXGS 542
+ RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.7 bits (91), Expect = 2e-05
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAXATTGGALRSPRPVYLITVP 443
++ +W D +L W+ E+G L V S+ +WRPD+VL N + + T
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 444 SPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
+ + + +P D QTC GS + +DL
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDL 179
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAXATTG 398
N+ E ++ L+ W D +L W+ ++G L + +++W+PD+VL NA
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 124
Query: 399 GALRSPRPVY----LITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXM 566
+S +Y ++ VP P I + + + + +P D QTC GS D +
Sbjct: 125 VRYKSNVLIYPNGDVLWVP-PAIYQ----SSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
Query: 567 DLXX*LXNXQYVPTXRXW 620
L N +V W
Sbjct: 180 SLAL-YNNKNFVDLSDYW 196
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN 380
N++ T + ++ W D +L WN E+G L V SE +W PD+VL N
Sbjct: 74 NLKNQVMTTNV--WVEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYN 124
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.3 bits (85), Expect = 9e-05
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Frame = +3
Query: 243 STVRILAXLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAXATTGGALRSPR 419
S + + + + + W D LSW ++ ++ V S+ +W PD+ + N+ T P
Sbjct: 87 SVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIP- 145
Query: 420 PVYLITVPSPGIXRLDISTPI---XMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
P + S + + + +WP D C GS +H + +++
Sbjct: 146 PTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNI 199
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 38.3 bits (85), Expect = 9e-05
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLN 380
++ W D +L WN ++G T V SE +W PD+VL N
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.5 bits (83), Expect = 2e-04
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAXATTGGALRSPRPVYL---- 431
L++ W D + WN ++G L + RLW+PDV++ N+ A G P V +
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNS-ADEGFDGTYPTNVVVKNNG 134
Query: 432 --ITVPSPGIXRLDISTPIXMQLXNWPNDXQTCTFXXGSRMHXXDXMDL 572
+ VP PGI + + + + +P D Q C GS + +DL
Sbjct: 135 TCLYVP-PGIFK----STCKIDITWFPFDDQRCEMKFGSWTYDGFQLDL 178
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 279 WIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVLLN 380
W D L WNA E+ G V R+WRPD +L N
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYN 96
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.9 bits (64), Expect = 0.032
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +3
Query: 345 ERLWRPDVVLLNAXATTGGALRSPRPVYLITVPSPGIX---RLDISTPIXMQLXNWPNDX 515
+ +WRPD NA + T + P YL I +L + M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNH-YLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDT 174
Query: 516 QTCTFXXGSRMHXXDXM 566
Q C S H D M
Sbjct: 175 QECKLQMESLSHTTDEM 191
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.6 bits (56), Expect = 0.30
Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Frame = +3
Query: 225 NIRESESTVRILAXLQMNWIDKRLSW--NAGEWGCXTWLVSSERLWRPDVVLLNAXATTG 398
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 399 GALRSPRPVYLITVPSPGIX---RLDISTPIXMQLXNWPNDXQTCTFXXGSRMH 551
+ P YL + +L + M+ ++P+D Q C+ S H
Sbjct: 103 HEMSIPNH-YLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 345 ERLWRPDVVLLNAXATTGGAL 407
+ LW+PD LNA + AL
Sbjct: 69 DSLWQPDPYFLNAKVSEIAAL 89
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 401 GTTLSATRVSNNGSVSWHXALGH 469
G A+ +NNG + H LGH
Sbjct: 258 GNGNGASNNNNNGDMFCHTGLGH 280
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 332 PSAAAPFPCVPTQS 291
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,246
Number of Sequences: 438
Number of extensions: 4566
Number of successful extensions: 48
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -