Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_J02
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    32   1.1  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    32   1.1  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    32   1.1  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    31   1.5  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 535  PPSPXDLGYINPIIKSP-NSIHQPPQT*HPFPSIPXTPYXKEFAPGLKPPLSS 690
            PPSP  L    P +      +  PP T  P P+IP TP   + A  L PP S+
Sbjct: 918  PPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTSA 969


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 535  PPSPXDLGYINPIIKSP-NSIHQPPQT*HPFPSIPXTPYXKEFAPGLKPPLSS 690
            PPSP  L    P +      +  PP T  P P+IP TP   + A  L PP S+
Sbjct: 907  PPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTSA 958


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 535 PPSPXDLGYINPIIKSP-NSIHQPPQT*HPFPSIPXTPYXKEFAPGLKPPLSS 690
           PPSP  L    P +      +  PP T  P P+IP TP   + A  L PP S+
Sbjct: 711 PPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTSA 762


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +1

Query: 529 IKPPSPXD-LGYINPIIKSPNSIHQPPQT*HPFPSIPXTPYXKEFAPGLKPPLSSXAP 699
           + PP P     Y  P I  P   + PPQ   P P IP +P   ++ P   PP     P
Sbjct: 474 LPPPQPKSGYDYPKPAIPFPAPTN-PPQKYLPPPVIPTSPPVPKYLPPTNPPTPQYLP 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,213,106
Number of Sequences: 53049
Number of extensions: 772016
Number of successful extensions: 2195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2190
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)