Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_J02
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 31 1.4
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 31 1.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
U29614-4|ABD94109.1| 244|Caenorhabditis elegans Hypothetical pr... 28 7.3
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 7.3
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRL-----SRRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL + SR +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRL-----SRRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL + SR +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRL-----SRRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL + SR +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +1
Query: 535 PPSPXDLGYINPIIKSPNSIHQPPQT*HP-----FPSIPXTPYXKEFAPGLKPPLSS 690
PP P Y+ + + PP +P P+ P PY + P PPL+S
Sbjct: 30 PPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLAS 86
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 359
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>U29614-4|ABD94109.1| 244|Caenorhabditis elegans Hypothetical
protein F18E9.8 protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 657 VRAGVKASVVIRXSHXRISPPRH 725
+R G K S VIR S + PP+H
Sbjct: 216 IRTGNKESAVIRVSERSVQPPKH 238
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 101 GFGRRESIDQGGNGRSGKKR 42
GFG + DQGGNG SG ++
Sbjct: 72 GFGGGSNYDQGGNGNSGDQQ 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,821,393
Number of Sequences: 27780
Number of extensions: 361435
Number of successful extensions: 1082
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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