Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_I14
(811 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 30 0.022
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.029
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.029
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 30 0.029
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.029
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.039
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.051
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.067
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 28 0.089
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.12
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.27
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 27 0.27
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.9
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.5
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 5.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.7
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAAAT-AGDYALRARVSNNGSVSW 456
V S+ +WRPD+VL N A A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGS 547
+ ++ +P D QTC KFGS
Sbjct: 155 IDVEYFPFDEQTCVLKFGS 173
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAAAT-AGDYALRARVSNNGSVSW 456
V S+ +WRPD+VL N A A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGS 547
+ ++ +P D QTC KFGS
Sbjct: 151 IDVEYFPFDEQTCVMKFGS 169
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 22.6 bits (46), Expect = 4.4
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R +G + LTL ++ ++ E + L++ W D + WN G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 30.3 bits (65), Expect = 0.022
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGS 547
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAG 317
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.029
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.36
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +3
Query: 144 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV 323
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 324 G 326
G
Sbjct: 124 G 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.029
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.36
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +3
Query: 144 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV 323
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 324 G 326
G
Sbjct: 124 G 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.9 bits (64), Expect = 0.029
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAAATAGDYAL-RARVSNNGSVSW 456
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 506 WPNDMQTCTFKFGS 547
+P D QTC KFGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.029
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAAATAGDYAL----RARVSNNGSVSW 456
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGS 547
+ ++ +P D Q+C KFGS
Sbjct: 160 INVEYFPFDEQSCIMKFGS 178
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.051
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAAATAGDYAL----RARVSNNGSVSW 456
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGS 547
+ ++ +P D QTC KFGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.067
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAAATAGDYAL----RARVSNNGSVSW 456
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 25.0 bits (52), Expect = 0.83
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 488 SMQLDNWPNDMQTCTFKFGS 547
S+ ++ +P D+QTC K GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 28.3 bits (60), Expect = 0.089
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 503 NWPNDMQTCTFKFGSRMHXSDKWXS*LDKXIYSM 604
+WP D C FGS +H ++ LDK + M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAAATAGDYALRAR----VSNNGSVSW 456
+++W+PD+VL N A G+Y +R + + NG V W
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 25.8 bits (54), Expect = 0.47
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 338
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDK 568
+P D QTC KFGS D+
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQ 178
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAAATAGDYALRAR--VSNNGSVSW 456
V R+WRPD +L N A + VS+ G V W
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-AATAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +3
Query: 159 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 177 PPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 314
P + ++ L ++H N+ E TV L++ W L+W +
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDK 568
WP D+ CT S H S++
Sbjct: 166 WPYDILNCTIHIASWSHGSNE 186
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 26.6 bits (56), Expect = 0.27
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGS 547
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 5.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 352 ERLWRPDVVLLN 387
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.6 bits (56), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 198 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHL 338
+V + L +R A I + + +Q + W+D+RL +N G L++L
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.9
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 198 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHL 338
VV + + +R + I + +Q + W+D+RL +N G L++L
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 458 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 556
+ +L + +M+ +++P+D Q C+ S H
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.4
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 192 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 359
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 360 V 362
+
Sbjct: 299 I 299
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDK 568
+L + +M +P+D Q C + S H +D+
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDE 190
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 501 TIGPTTCRLARSSSVLGCTXVTNGXRDWTK 590
+ G R R S+ L C V + R+W K
Sbjct: 1318 SFGGHVVRPWRGSATLACNAVGDPTREWYK 1347
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 501 TIGPTTCRLARSSSVLGCTXVTNGXRDWTK 590
+ G R R S+ L C V + R+W K
Sbjct: 1314 SFGGHVVRPWRGSATLACNAVGDPTREWYK 1343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,000
Number of Sequences: 438
Number of extensions: 4420
Number of successful extensions: 61
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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