Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_I02
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 31 1.3
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.7
U41991-11|AAA83351.2| 199|Caenorhabditis elegans Hypothetical p... 30 2.2
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 29 5.2
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 24 6.7
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical ... 28 6.8
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z83244-8|CAH10803.1| 454|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z83244-3|CAD18878.1| 437|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z83244-2|CAB60300.2| 462|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 28 9.0
AF143244-1|AAD37361.1| 462|Caenorhabditis elegans protein kinas... 28 9.0
AF143243-1|AAD37360.1| 454|Caenorhabditis elegans protein kinas... 28 9.0
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 312 FRGSCHFCGKPGHRAEGC 259
F G+C++CGK GH A C
Sbjct: 407 FVGNCYYCGKRGHTANEC 424
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 312 FRGSCHFCGKPGHRAEGC 259
F+G CH+C GH A C
Sbjct: 572 FKGQCHYCKNVGHMARNC 589
>U41991-11|AAA83351.2| 199|Caenorhabditis elegans Hypothetical
protein C42D4.13 protein.
Length = 199
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 457 TRPRLQHGLPILEPPRSGCTCARA---RRLVGDLKRKNEDPDKE 335
T P+ G PP GC C R+ +R G+ + E+P+ E
Sbjct: 84 TIPKQADGTDCPMPPECGCLCGRSGRKKRETGEFWKNTEEPESE 127
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 315 FFRGSCHFCGKPGHRAEGCCDR 250
F +G+C CG GH+ C DR
Sbjct: 110 FRKGACENCGAMGHQKRDCFDR 131
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 306 GSCHFCGKPGHRAEGC 259
GSC+ CG GH + C
Sbjct: 67 GSCYNCGGRGHYSRDC 82
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1
Query: 162 CYVCGDASHVASGCS 118
CY CG + H++ C+
Sbjct: 109 CYNCGRSGHISRECT 123
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 537 AEVSPPATCADSQDILPPCKLLTATXLTSHHAXYNFTGSTSLTR 668
A + P T S + PP TA + + NF+G+ S+TR
Sbjct: 205 AGILPATTTNVSAAVPPPSSRATANVFSGNSIGLNFSGAASVTR 248
>AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical
protein F59E11.11 protein.
Length = 422
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -1
Query: 147 DASHVASGCSMRFNFCSLRAIRRYKSYYVD*GSLEYDSSNNKNP 16
DA+HV S S R++ LR++ +YY D SL DS N NP
Sbjct: 282 DATHVKSEWSTRYSMEELRSLLDIPTYYSD--SL-VDSFINVNP 322
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 226 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 263
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 226 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 263
>Z83244-8|CAH10803.1| 454|Caenorhabditis elegans Hypothetical
protein W06F12.1e protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 79 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 116
>Z83244-3|CAD18878.1| 437|Caenorhabditis elegans Hypothetical
protein W06F12.1c protein.
Length = 437
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 62 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 99
>Z83244-2|CAB60300.2| 462|Caenorhabditis elegans Hypothetical
protein W06F12.1b protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 87 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 124
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 259 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 296
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 259 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 296
>AF143244-1|AAD37361.1| 462|Caenorhabditis elegans protein kinase
LIT-1b protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 87 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 124
>AF143243-1|AAD37360.1| 454|Caenorhabditis elegans protein kinase
LIT-1a protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 337 EPKRSRSFFPWKLPFLRKTWASCRRVLRQILLSNFFRY 224
+P+ + K+P + + ASC+RV R+I + + FR+
Sbjct: 79 DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,139,181
Number of Sequences: 27780
Number of extensions: 317712
Number of successful extensions: 1150
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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