Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_I01
(856 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 5e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 7e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 8e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 8e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 9e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.041
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.041
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.29
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.3
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 115 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 294
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 295 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQL 468
G ++ +LW+PD+++ N+A G Y V++NGS + + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 469 DNWPNDMQTCTFKFGS 516
+P D Q C KFGS
Sbjct: 184 TWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 115 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 294
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 295 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQL 468
G ++ +LW+PD+++ N+A G Y V++NGS + + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 469 DNWPNDMQTCTFKFGS 516
+P D Q C KFGS
Sbjct: 184 TWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V++NGS + + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 55.6 bits (128), Expect = 5e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V+++GS + + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V+++GS + + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 55.2 bits (127), Expect = 7e-10
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 336
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 337 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTF 504
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 505 KFGSXMXXXD 534
KFGS D
Sbjct: 168 KFGSWTFNGD 177
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.8 bits (126), Expect = 1e-09
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 336
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 337 PDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFG 513
PD+VL NA A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 514 S 516
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 417
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 418 VSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
V + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V+++GS + + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V+++GS + + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G Y V+++GS + + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.6 bits (123), Expect = 2e-09
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 130 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 309
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 310 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPN 483
L + RLW+PDV++ N+A G Y V NNG+ + + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 484 DMQTCTFKFGS 516
D Q C KFGS
Sbjct: 158 DDQRCEMKFGS 168
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.2 bits (122), Expect = 3e-09
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +1
Query: 166 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 333
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 334 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKF 510
PD+VL N A G + +A + G V + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 511 GS 516
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.4 bits (120), Expect = 5e-09
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 336
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 337 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTF 504
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 505 KFGS 516
K GS
Sbjct: 170 KLGS 173
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.0 bits (119), Expect = 7e-09
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +1
Query: 205 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 375
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 376 GDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
R+ +G V RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 408
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 409 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
G VS + + ++ +P D Q+C KFGS
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.4 bits (115), Expect = 2e-08
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +1
Query: 133 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 306
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 307 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPXSMQLDN 474
V SE +W PD+VL N A G+Y + +A + + G V + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 475 WPNDMQTCTFKFGS 516
+P D QTC KFGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.4 bits (110), Expect = 8e-08
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +1
Query: 163 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 333
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 334 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTF 504
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 505 KFGS 516
FGS
Sbjct: 186 NFGS 189
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 166 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 342
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 343 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 247 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 417
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 418 VSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+ RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +1
Query: 172 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 348
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 349 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+ + + ++ V N+G++ + + WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIAS 179
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.3 bits (90), Expect = 2e-05
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Frame = +1
Query: 169 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 339
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 340 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKF 510
D+ N + + R+ NGSV R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 511 GS 516
S
Sbjct: 179 AS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 205 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 384
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 385 ALR---ARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 409 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 409 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 409 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.5 bits (83), Expect = 2e-04
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 420
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 421 SXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
R+ ++ M L +P D Q C+ + S
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 115 STRSSQRTIGSLPPXSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 288
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSM 462
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMQTCTFKFGS 516
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 115 STRSSQRTIGSLPPXSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 288
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSM 462
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMQTCTFKFGS 516
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.006
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 115 STRSSQRTIGSLPPXSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 288
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSM 462
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMQTCTFKFGS 516
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.041
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +1
Query: 166 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 339
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 340 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFG 513
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 514 S 516
S
Sbjct: 257 S 257
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.041
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +1
Query: 214 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 381
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 382 YALRAR---VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFKFGS 516
++ + ++ ++ + +L + +M+ +++P+D Q C+ S
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIES 152
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.29
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 166 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 327
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 328 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPXSMQLDNWPNDMQ 492
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 493 TC 498
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +1
Query: 322 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQ 492
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 493 TCTFKFGSXMXXXD 534
C + S D
Sbjct: 176 ECKLQMESLSHTTD 189
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 309 PSAAAPFPCVPTQS 268
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,460
Number of Sequences: 438
Number of extensions: 3234
Number of successful extensions: 83
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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