Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_H09
(883 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 37 3e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 7e-04
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 6.5
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 8.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.0 bits (114), Expect = 3e-08
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Frame = +1
Query: 85 SLVL*LVQAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRE 243
+++L L C + D LL+ Y+R P S +VV L L L N+++
Sbjct: 5 TIILILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKD 64
Query: 244 SESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXNAAATTAGDYAL 420
T + L+ W D + W+ E+G T L V SE +W PD+VL N A G +
Sbjct: 65 QILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTM 122
Query: 421 -RARVSNNGSVSW 456
+A + G V W
Sbjct: 123 TKAILHYTGKVLW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.4 bits (110), Expect = 9e-08
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 279
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAAA 396
+ W L+W + E+ ++ V S +W PD+V+ + +
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTS 127
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 489 LCSXDH--WPNDMQTCTFNVPFYDAHXDDXDFGXSXTEYXL 605
+C DH WP D+ CT ++ + ++ TE L
Sbjct: 158 VCEYDHTWWPYDILNCTIHIASWSHGSNEIKLNSLDTEQIL 198
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.0 bits (109), Expect = 1e-07
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Frame = +1
Query: 88 LVL*LVQAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRES 246
+VL L+ C + D LL+ Y++ P + LT+ ++ N++
Sbjct: 11 IVLVLISG-CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQ 69
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAAATTAGDYAL 420
T + ++ +W D +L W+ E+G L V S+ +WRPD+VL NA A
Sbjct: 70 IMTTNLW--VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLAT 127
Query: 421 RARVSNNGSVSW 456
+A ++ G V W
Sbjct: 128 KATLNYTGRVEW 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 5e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 300
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 301 LSWNAGEWGCSTWL-VSSERLWRPDVVLXNAAATTAGDYAL----RARVSNNGSVSW 456
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPDVVL-XNAAATTAGDYALRARVSNNGSVSW 456
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.8 bits (101), Expect = 1e-06
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKR 300
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 301 LSWNAGEWG-CSTWLVSSERLWRPDVVLXNAAATTAGDYAL----RARVSNNGSVSW 456
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 VVLXNAAATTAGDYALRAR--VSNNGSVSWI 459
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLXN 387
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.0 bits (99), Expect = 2e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDVVLXNAAATTAGDYALRAR----VSNNGSVSWI 459
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.6 bits (98), Expect = 2e-06
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 306
+++ LL TY+ P +V++ L L ++ E + L++ W D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 307 WNAGEWGCSTWL-VSSERLWRPDVVLXNAA-ATTAGDYALRARVSNNGSVSWI 459
WN ++G L + RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPDVVLXNAAATTAGDYAL----RARVSNNGSVSW 456
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.3 bits (85), Expect = 9e-05
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +1
Query: 118 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 285
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 286 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAAATT---AGDYALRARVSNNGSVS 453
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 454 WI 459
+
Sbjct: 159 CV 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 36.7 bits (81), Expect = 3e-04
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +1
Query: 130 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 294
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 295 KRLSWNAGEWGCSTWLVSSERLWRPDVVLXNAAATTAGDYAL---RARVSNNGSVSWIKR 465
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 466 LDI 474
L I
Sbjct: 156 LTI 158
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.5 bits (78), Expect = 7e-04
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 300
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 301 LSWN--AGEWGCSTWLVSSERLWRPDVVLXNAAATTAGDYAL---RARVSNNGSVSWIKR 465
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 466 LDIS 477
+ ++
Sbjct: 154 ISLT 157
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 469 DISTPIFYAV*TIGPTTC 522
DIS+P IGPTTC
Sbjct: 356 DISSPDAVEYGIIGPTTC 373
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 60 YXILLPFLLTCAIAS 104
Y ILL L+TC I S
Sbjct: 3 YSILLSLLITCLICS 17
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,939
Number of Sequences: 438
Number of extensions: 3785
Number of successful extensions: 58
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -