BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_H05
(812 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 38 0.043
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 38 0.043
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 38 0.043
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 38 0.043
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 34 0.53
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 32 2.1
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 32 2.1
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 32 2.1
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 32 2.1
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 32 2.1
AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein. 32 2.8
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.7
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.7
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.7
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein. 31 6.5
BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family... 30 8.7
AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family... 30 8.7
AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular carcinom... 30 8.7
AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein. 30 8.7
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 37.9 bits (84), Expect = 0.043
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 550 SRATSTRSSNPRIPYTNHPRT*HPFP-SIPXTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 726
SR+++ + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 407 SRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 37.9 bits (84), Expect = 0.043
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 550 SRATSTRSSNPRIPYTNHPRT*HPFP-SIPXTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 726
SR+++ + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 407 SRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 37.9 bits (84), Expect = 0.043
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 550 SRATSTRSSNPRIPYTNHPRT*HPFP-SIPXTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 726
SR+++ + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 159 SRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 218
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 37.9 bits (84), Expect = 0.043
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 550 SRATSTRSSNPRIPYTNHPRT*HPFP-SIPXTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 726
SR+++ + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 438 SRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 497
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 34.3 bits (75), Expect = 0.53
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 562 STRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 726
STR S + ++ P + PFP +P +P FAP L+PP +AP + P L
Sbjct: 72 STRLSGALLSPSDRPPS-SPFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 595 TNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 726
T P T P P P TP E +P PP S P SA+LTPSSL
Sbjct: 202 TTSPNT-KPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 595 TNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 726
T P T P P P TP E +P PP S P SA+LTPSSL
Sbjct: 45 TTSPNT-KPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 595 TNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 726
T P T P P P TP E +P PP S P SA+LTPSSL
Sbjct: 341 TTSPNT-KPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 595 TNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 726
T P T P P P TP E +P PP S P SA+LTPSSL
Sbjct: 341 TTSPNT-KPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 595 TNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 726
T P T P P P TP E +P PP S P SA+LTPSSL
Sbjct: 341 TTSPNT-KPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein.
Length = 963
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 388 FPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRATST 567
FP A S + + LCWT + A +++ G AL + L R+RA S
Sbjct: 18 FPEAGSTHSRLCLLLCWTLIEAVGSRAKKEAAAEEAKVGWGCPALRPEVPLTLRARAISL 77
Query: 568 RSSNPRIPYTNHP 606
+S+ R + +P
Sbjct: 78 MASSGRKLWLRYP 90
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein.
Length = 268
Score = 30.7 bits (66), Expect = 6.5
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Frame = +1
Query: 391 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWR-----SR 555
PSAP + +PVT L + V G + A PS++ +T A +P S
Sbjct: 155 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 213
Query: 556 ATSTRSSNPRIPY---TNHPRT*HP 621
AT+ IP +PRT HP
Sbjct: 214 ATAASEEMQTIPQATAAKYPRTIHP 238
>BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 30.3 bits (65), Expect = 8.7
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Frame = +1
Query: 400 PSLKIPVTV-DLCWTTADVTVE---GVNVLATPSSSRITIG----GLALMHQATLPW-RS 552
PS +P T+ + + T+ G +VL TPS T G L TL
Sbjct: 76 PSTFVPPTISEASSASGQPTISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEG 135
Query: 553 RATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTPS 720
R TS ++ P T+ P T PS P E PP + E PS + P+
Sbjct: 136 RNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPT 191
>AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 30.3 bits (65), Expect = 8.7
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Frame = +1
Query: 400 PSLKIPVTV-DLCWTTADVTVE---GVNVLATPSSSRITIG----GLALMHQATLPW-RS 552
PS +P T+ + + T+ G +VL TPS T G L TL
Sbjct: 76 PSTFVPPTISEASSASGQPTISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEG 135
Query: 553 RATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTPS 720
R TS ++ P T+ P T PS P E PP + E PS + P+
Sbjct: 136 RNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPT 191
>AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular
carcinoma-associated protein HCA1 protein.
Length = 957
Score = 30.3 bits (65), Expect = 8.7
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Frame = +1
Query: 400 PSLKIPVTV-DLCWTTADVTVE---GVNVLATPSSSRITIG----GLALMHQATLPW-RS 552
PS +P T+ + + T+ G +VL TPS T G L TL
Sbjct: 76 PSTFVPPTISEASSASGQPTISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEG 135
Query: 553 RATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTPS 720
R TS ++ P T+ P T PS P E PP + E PS + P+
Sbjct: 136 RNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPT 191
>AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein.
Length = 991
Score = 30.3 bits (65), Expect = 8.7
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Frame = +1
Query: 400 PSLKIPVTV-DLCWTTADVTVE---GVNVLATPSSSRITIG----GLALMHQATLPW-RS 552
PS +P T+ + + T+ G +VL TPS T G L TL
Sbjct: 110 PSTFVPPTISEASSASGQPTISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEG 169
Query: 553 RATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTPS 720
R TS ++ P T+ P T PS P E PP + E PS + P+
Sbjct: 170 RNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPT 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,049,116
Number of Sequences: 237096
Number of extensions: 2522033
Number of successful extensions: 6837
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6832
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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