Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_G24
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 25 1.2
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 1.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 1.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 1.6
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 23 4.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.9
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 23 4.9
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 6.5
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 6.5
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 6.5
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 8.6
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 325 KNENVQYGKRPYPGAKHYCNERRTERSAWSAPAPP 429
+NEN + KRP G + + + WS P P
Sbjct: 18 RNENDPFLKRPITGDEKWVVNNIKRKRWWSRPREP 52
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 612 TPKDEPGPG 638
TPK+EPGPG
Sbjct: 21 TPKEEPGPG 29
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 612 TPKDEPGPG 638
TPK+EPGPG
Sbjct: 21 TPKEEPGPG 29
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 612 TPKDEPGPG 638
TPK+EPGPG
Sbjct: 21 TPKEEPGPG 29
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 59 HFLFEHISKTHTLVQLFSQ 3
H LF H S+ ++Q F Q
Sbjct: 148 HLLFRHFSQRQEVLQAFKQ 166
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 378 IMLRAGIWTLPILHVFV 328
+MLR IWTL + +FV
Sbjct: 1 MMLRCNIWTLAVNVLFV 17
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 378 IMLRAGIWTLPILHVFV 328
+MLR IWTL + +FV
Sbjct: 1 MMLRCNIWTLAVNVLFV 17
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 378 IMLRAGIWTLPILHVFV 328
+MLR IWTL + +FV
Sbjct: 1 MMLRCNIWTLAVNVLFV 17
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 59 HFLFEHISKTHTLVQLFSQ 3
H LF H S+ ++Q F Q
Sbjct: 116 HLLFRHFSQRQEVLQAFKQ 134
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 23 KYEFSKYVRIK 55
KYEFSKY ++K
Sbjct: 147 KYEFSKYDKLK 157
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 23 KYEFSKYVRIK 55
KYEFSKY ++K
Sbjct: 162 KYEFSKYDKLK 172
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 23 KYEFSKYVRIK 55
KYEFSKY ++K
Sbjct: 50 KYEFSKYDKLK 60
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 615 PKDEPGPGSRRP 650
P+ PGPGS+ P
Sbjct: 54 PRRNPGPGSKGP 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,584
Number of Sequences: 438
Number of extensions: 3381
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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