Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_G19
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.007
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.19
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.19
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.19
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
Z81475-2|CAB03908.1| 384|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81475-1|CAB03912.1| 384|Caenorhabditis elegans Hypothetical pr... 29 4.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 28 9.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 9.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Frame = +2
Query: 602 PXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXK-----XPPXXXXXXXXPXXXXFXPPPP 766
P PPP P P TP + PPP PP P PPPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 767 XXXXXXXXXXXGXXXPPPP 823
G PPPP
Sbjct: 321 PPSRFGPPGMGGMPPPPPP 339
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 614 PPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
PPP +P P P + PG PP P PPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXP---PXXXXXXXXPXXXXFXPPP 763
P P PPP P P PPPG + P P PPP
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
Query: 764 PXXXXXXXXXXXGXXXPPPP 823
P G PPPP
Sbjct: 367 PPSRPPAPPSGHGMIPPPPP 386
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXX 772
P PPP +P P P P PP P PPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP-- 338
Query: 773 XXXXXXXXXGXXXPPPPXF 829
G PPPP +
Sbjct: 339 --PGMRYPGGMPPPPPPRY 355
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Frame = +2
Query: 602 PXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXK-----XPPXXXXXXXXPXXXXFXPPPP 766
P PPP P P TP + PPP PP P PPPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 767 XXXXXXXXXXXGXXXPPPP 823
G PPPP
Sbjct: 331 PPSRFGPPGMGGMPPPPPP 349
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 614 PPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
PPP +P P P + PG PP P PPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXP---PXXXXXXXXPXXXXFXPPP 763
P P PPP P P PPPG + P P PPP
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
Query: 764 PXXXXXXXXXXXGXXXPPPP 823
P G PPPP
Sbjct: 377 PPSRPPAPPSGHGMIPPPPP 396
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXX 772
P PPP +P P P P PP P PPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP-- 348
Query: 773 XXXXXXXXXGXXXPPPPXF 829
G PPPP +
Sbjct: 349 --PGMRYPGGMPPPPPPRY 365
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 614 PPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXXXXXXXXX 793
PPP K P +P PPP PP P PPPP
Sbjct: 239 PPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 794 XXGXXXPPPP 823
PPPP
Sbjct: 294 AGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 614 PPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXXXXXXXXX 793
PPP K P +P PPP PP P PPPP
Sbjct: 260 PPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 794 XXGXXXPPPP 823
PPPP
Sbjct: 315 AGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 614 PPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXXXXXXXXX 793
PPP K P +P PPP PP P PPPP
Sbjct: 245 PPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 794 XXGXXXPPPP 823
PPPP
Sbjct: 300 AGSPPPPPPP 309
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
P P PPP + P P + PPP PP P PPPP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKS-PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGGGXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXXX 643
GGGG P GGGG G GG GGG G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Query: 642 GXXXXXXGGG 613
G GGG
Sbjct: 127 GGGGCGGGGG 136
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGG-GXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXX 646
GGGG P GGG G G GG GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Query: 645 XGXXXXXXGGGLXXGXXG 592
G GGG G G
Sbjct: 128 GGGCGGGGGGGCGGGSSG 145
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGGGXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXXX 643
GGGG P GGGG G GG GGG G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGC-GGGGGCAPPPAPCGGGCGGGGGGCG--GGGGGCGG 99
Query: 642 GXXXXXXGGGLXXGXXG 592
G GGG G G
Sbjct: 100 GGGCGGGGGGCGGGGGG 116
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGGGXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXXX 643
GGGG P GGGG G GG GGG G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Query: 642 GXXXXXXGGG 613
G GGG
Sbjct: 127 GGGGCGGGGG 136
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGG-GXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXX 646
GGGG P GGG G G GG GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Query: 645 XGXXXXXXGGGLXXGXXG 592
G GGG G G
Sbjct: 128 GGGCGGGGGGGCGGGSSG 145
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGGGXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXXX 643
GGGG P GGGG G GG GGG G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGC-GGGGGCAPPPAPCGGGCGGGGGGCG--GGGGGCGG 99
Query: 642 GXXXXXXGGGLXXGXXG 592
G GGG G G
Sbjct: 100 GGGCGGGGGGCGGGGGG 116
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 7/117 (5%)
Frame = +2
Query: 494 PSSSRITIGGLALMHQATLPXXSRXTSTXIIXXPXXPXXXPPPXXKXXFPXXXPX----- 658
PSS+ I G + A P +R S + P P PP P
Sbjct: 540 PSSAPIGSGASSYSTPAAPPPPTRVESHGLA--PARPPPPPPSSGTRGIAPSRPLPQAPN 597
Query: 659 --TPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXXXXXXXXXXXGXXXPPPP 823
TP + PP PP PPPP G PPPP
Sbjct: 598 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 7/117 (5%)
Frame = +2
Query: 494 PSSSRITIGGLALMHQATLPXXSRXTSTXIIXXPXXPXXXPPPXXKXXFPXXXPX----- 658
PSS+ I G + A P +R S + P P PP P
Sbjct: 366 PSSAPIGSGASSYSTPAAPPPPTRVESHGLA--PARPPPPPPSSGTRGIAPSRPLPQAPN 423
Query: 659 --TPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXXXXXXXXXXXGXXXPPPP 823
TP + PP PP PPPP G PPPP
Sbjct: 424 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +2
Query: 560 SRXTSTXIIXXPXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPX 739
S TS P P PPP + P P + PPP PP P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKS-PPPPPPLPPIATPSSVPPP 507
Query: 740 XXXFXPPPP 766
PPPP
Sbjct: 508 ----PPPPP 512
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 261 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 365
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>Z81475-2|CAB03908.1| 384|Caenorhabditis elegans Hypothetical
protein C24H11.2 protein.
Length = 384
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 YWHRNQIEQCH--CAITTERLL--HHKRLPRRVSCSILRAVVFPSAPSLKIPVTVDLCWT 451
Y H NQ+ CAI ++R+L H P S +RA+ P + P+ DL W
Sbjct: 209 YNHFNQVFSYMPLCAIVSKRILCMHGGISPHLKSLDDIRAIPLPLETAKTHPLACDLLWA 268
Query: 452 TADVTVEG 475
+ +G
Sbjct: 269 DPEKDAKG 276
>Z81475-1|CAB03912.1| 384|Caenorhabditis elegans Hypothetical
protein C24H11.1 protein.
Length = 384
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 YWHRNQIEQCH--CAITTERLL--HHKRLPRRVSCSILRAVVFPSAPSLKIPVTVDLCWT 451
Y H NQ+ CAI ++R+L H P S +RA+ P + P+ DL W
Sbjct: 209 YNHFNQVFSYMPLCAIVSKRILCMHGGISPHLKSLDDIRAIPLPLETAKTHPLACDLLWA 268
Query: 452 TADVTVEG 475
+ +G
Sbjct: 269 DPEKDAKG 276
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXX 772
P PPP P P PPP PP P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 773 XXXXXXXXXGXXXPPPP 823
G PPPP
Sbjct: 775 PPPGGFKG-GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXX 772
P PPP P P PPP PP P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 773 XXXXXXXXXGXXXPPPP 823
G PPPP
Sbjct: 775 PPPGGFKG-GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +2
Query: 593 PXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPPXX 772
P PPP P P PPP PP P PPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 773 XXXXXXXXXGXXXPPPP 823
G PPPP
Sbjct: 358 PPPGGFKG-GPPPPPPP 373
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +2
Query: 569 TSTXIIXXPXXPXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXX 748
TS P P PPP P P P P G P P
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL 1389
Query: 749 FXPPPP 766
PPPP
Sbjct: 1390 PPPPPP 1395
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 822 GGGGXXXPXXXXXXXXXXXGGGGXKXXXXGXXXXXXXXGGXLXPGGGXXFLIXGVXGXXX 643
GGG P GGGG G GG GGG G G
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGG 165
Query: 642 GXXXXXXGGGLXXGXXG 592
G GGG G G
Sbjct: 166 GGGGCGGGGGGGCGGGG 182
>Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical
protein F30A10.1 protein.
Length = 311
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 31 CAFXSFLAASAIPSLVNAFSSSKPPQ 108
C F + +PS V FS SKPPQ
Sbjct: 43 CIFFFAFSPRGLPSNVTPFSDSKPPQ 68
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 602 PXXXPPPXXKXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
P PPP P P P F PP PP P PPPP
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP-----PPPPPPPPMCPPPP 78
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 614 PPPXX--KXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
PPP + P P P PP G PP P F PPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFGMG-PPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 614 PPPXX--KXXFPXXXPXTPXIKXXFPPPGXKXPPXXXXXXXXPXXXXFXPPPP 766
PPP + P P P PP G PP P F PPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFGMG-PPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,236,132
Number of Sequences: 27780
Number of extensions: 265038
Number of successful extensions: 790
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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