Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_G16
(902 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 3e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 6e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 33 0.005
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.005
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.005
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.005
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.077
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 2.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 2.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 2.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 2.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.8 bits (131), Expect = 3e-10
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Frame = +3
Query: 261 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 429 QTCTFKFGSRMHNSDEMDLVI--DKRIYSM---FESGAWDVTDL 545
QTC KFGS N D++ L + +K + ++SG WD+ ++
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.8 bits (116), Expect = 2e-08
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 429 QTCTFKFGSRMHNSDEMDLVIDKR----IYSMFESGAWDV 536
Q C KFGS ++ ++DL + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 50.4 bits (115), Expect = 2e-08
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 422
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 423 DMQTCTFKFGSRMHNSDEMDLVIDKRIYSM 512
D C FGS +H+ +E+++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.4 bits (115), Expect = 2e-08
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 429 QTCTFKFGSRMHNSDEMDL 485
QTC KFGS ++ ++DL
Sbjct: 165 QTCVLKFGSWTYDGFKVDL 183
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-08
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 429 QTCTFKFGSRMHNSDEMDL 485
QTC KFGS ++ ++DL
Sbjct: 161 QTCVMKFGSWTYDGFQVDL 179
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.6 bits (113), Expect = 4e-08
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 234 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 401
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 402 QLDNWPNDMQTCTFKFGSRMHNSDEMDL 485
++ +P D Q+C KFGS +N ++DL
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVDL 188
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.8 bits (49), Expect = 2.2
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 50 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 214
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 215 WN 220
WN
Sbjct: 118 WN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.8 bits (49), Expect = 2.2
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 50 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 214
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 215 WN 220
WN
Sbjct: 118 WN 119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 419
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 420 NDMQTCTFKFGSRMHNSDEMDL 485
D+QTC K GS ++ ++DL
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVDL 183
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 48.0 bits (109), Expect = 1e-07
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 228 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 401
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 402 QLDNWPNDMQTCTFKFGSRMHNSDEMDL 485
+ +P D QTC KFGS ++ ++DL
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQIDL 175
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 429 QTCTFKFGSRMHNSDEMDLVI 491
Q C KFGS ++ +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 140 NIRESESTVRILADLQMNWIDKRLSWN 220
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.2 bits (102), Expect = 8e-07
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 234 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 401
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 402 QLDNWPNDMQTCTFKFGSRMHNSDEMDL 485
++ +P D QTC KFGS ++ +DL
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVDL 175
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.3 bits (95), Expect = 6e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 261 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 431
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 432 TCTFKFGS 455
+C GS
Sbjct: 175 SCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPND 425
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 426 MQTCTFKFGSRMHNSDEMDL 485
Q C K+ S ++ +++L
Sbjct: 142 EQRCVLKWASWTYDGYQLEL 161
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 264 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 434
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 435 CTFKFGS 455
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 29 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 196
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 197 IDKRLSWNAG 226
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 428
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 429 QTCTFKFGS 455
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 249 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 419
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 420 NDMQTCTFKFGSRMHNSDEM 479
D Q C+ + S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 249 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 419
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 420 NDMQTCTFKFGSRMHNSDEM 479
D Q C+ + S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 267 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 437
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 438 TFKFGSRMHNSDEM 479
+ S H + ++
Sbjct: 147 SMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.002
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 261 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 431
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 432 TCTFKFGSRMHNSDEM 479
C + S H +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Frame = +3
Query: 252 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--W 416
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 417 PNDMQTCTFKFGSRMHNSDEM---DLVIDKRIYSMFESGA-WDVTDLSSAVXSXD 569
P D+ CT S H S+E+ L ++ + M+ + W++ +S + + D
Sbjct: 167 PYDILNCTIHIASWSHGSNEIKLNSLDTEQILDDMYNNNTEWEIVHMSHSESTID 221
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 23 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 187
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 188 MNWIDKRLSWNA 223
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.7 bits (71), Expect = 0.005
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 267 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 437
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 438 TFKFGSRMHNSDEMDLVIDK 497
F S HN +M L D+
Sbjct: 157 PLIFESWTHNVLDMVLYWDQ 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.005
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 234 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 386
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 387 TPISMQLDNWPNDMQTCTFKFGS 455
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
Score = 23.4 bits (48), Expect = 2.9
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 196
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 197 IDKRLSW 217
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.005
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 234 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 386
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 387 TPISMQLDNWPNDMQTCTFKFGS 455
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
Score = 22.2 bits (45), Expect = 6.7
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 29 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 196
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 197 IDKRLSW 217
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.005
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 234 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 386
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 387 TPISMQLDNWPNDMQTCTFKFGS 455
M L +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.077
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +3
Query: 261 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 425
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 426 MQTCTFKFGSRMHNSDEMDL 485
+Q C S ++ ++ L
Sbjct: 127 IQICPIYIESFSYHKQKLRL 146
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 336 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 455
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 336 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 455
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 336 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 455
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 336 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 455
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,669
Number of Sequences: 438
Number of extensions: 5001
Number of successful extensions: 71
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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