Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_G14
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 1e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 5e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 6e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 0.001
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.004
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.096
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 26 0.51
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 487 QTCTFXFGSRMHNSDXMDFVI 549
QTC FGS N D + +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 4e-07
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 487 QTCTFXFGSRMHNSDXMD 540
QTC FGS ++ +D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 487 QTCTFXFGSRMHNSDXMD 540
QTC FGS ++ +D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSS 213
Score = 26.6 bits (56), Expect = 0.29
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +3
Query: 96 H*SLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWID 260
H +++ LL++Y+ P + V + L+ ++ E + A L++ W+D
Sbjct: 54 HEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 113
Query: 261 KRLSWNAGXVG 293
L WN G
Sbjct: 114 YNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSS 213
Score = 26.6 bits (56), Expect = 0.29
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +3
Query: 96 H*SLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWID 260
H +++ LL++Y+ P + V + L+ ++ E + A L++ W+D
Sbjct: 54 HEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 113
Query: 261 KRLSWNAGXVG 293
L WN G
Sbjct: 114 YNLQWNESEYG 124
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 460 QLDXWPNDMQTCTFXFGSRMHNSDXMD 540
++ +P D Q+C FGS +N +D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.0 bits (99), Expect = 2e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWP 477
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 478 NDMQTCTFXFGSRMHNSDXMD 540
D+QTC GS ++ +D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 43.2 bits (97), Expect = 3e-06
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 480
V S+ +W PD+ + N+ T G V ++GSVS + + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 481 DMQTCTFXFGSRMHNSDXMDFVIDTRXXSM 570
D C FGS +H+ + ++ +D + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 286 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 459
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 460 QLDXWPNDMQTCTFXFGSRMHNSDXMD 540
+ +P D QTC FGS ++ +D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.3 bits (95), Expect = 5e-06
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 487 QTCTFXFGSRMHNSDXMD 540
Q C FGS ++ +D
Sbjct: 160 QRCEMKFGSWTYDGFQLD 177
Score = 21.8 bits (44), Expect = 8.3
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +3
Query: 96 H*SLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWID 260
H +++ LL TY+ P +V++ L L ++ E + L++ W D
Sbjct: 23 HEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWND 82
Query: 261 KRLSWNAGXVG 293
+ WN G
Sbjct: 83 VNMRWNVSDYG 93
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 487 QTCTFXFGSRMHNSDXMDFVIDT 555
Q C FGS ++ + +D V+ +
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSS 145
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 460 QLDXWPNDMQTCTFXFGSRMHNSDXMD 540
++ +P D QTC FGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 490 TCTFXFGS 513
+C GS
Sbjct: 175 SCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPND 483
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 484 MQTCTFXFGS 513
Q C + S
Sbjct: 142 EQRCVLKWAS 151
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 322 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQT 492
R+W+PD N + T R+ +G V + RL I M L+ +P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 493 CTFXFGS 513
C FGS
Sbjct: 144 CPLQFGS 150
Score = 31.1 bits (67), Expect = 0.014
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 102 SLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRL 269
S ++D+LL YD PD V + + +R I E + T + + +W+D+RL
Sbjct: 7 SELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRL 66
Query: 270 SWNAG 284
++ G
Sbjct: 67 AFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 316 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 487 QTCT 498
Q CT
Sbjct: 173 QNCT 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.1 bits (77), Expect = 8e-04
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 281
L YDRD P+ K ++ L ++H N+ E TV L++ W L+W +
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
Score = 29.9 bits (64), Expect = 0.031
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 480
V S +W PD+V+ ++ + D ++ V N+G++ + + WP
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPY 168
Query: 481 DMQTCTFXFGSRMHNSD 531
D+ CT S H S+
Sbjct: 169 DILNCTIHIASWSHGSN 185
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.001
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 325 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 495
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + +P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 496 TFXFGSRMHNSDXMDFV 546
+ S H + + F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 307 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWP 477
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 478 NDMQTCTFXFGSRMHNSDXMDFV 546
D Q C+ S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 307 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWP 477
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 478 NDMQTCTFXFGSRMHNSDXMDFV 546
D Q C+ S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.13
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 108 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 266
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 267 LSWN 278
L +N
Sbjct: 95 LRFN 98
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 490 TCTFXFGSRMHNSDXMDFVID 552
C S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 445 TPISMQLDXWPNDMQTC 495
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 445 TPISMQLDXWPNDMQTC 495
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 445 TPISMQLDXWPNDMQTC 495
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 495
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 496 TFXFGSRMHN 525
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.096
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPND 483
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 484 MQTC 495
+Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXFGSRMHNSDXMDFV 546
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXFGSRMHNSDXMDFV 546
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXFGSRMHNSDXMDFV 546
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXFGSRMHNSDXMDFV 546
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 130 VARSESIMRDQ*CCVFAFCRTSYSTSEEKPVTRII 26
V +++ + + CC F T Y + K VT+ I
Sbjct: 593 VGQAKKYVAGEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,935
Number of Sequences: 438
Number of extensions: 4241
Number of successful extensions: 72
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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