Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_G01
         (912 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.    36   0.15 
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.     36   0.15 
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h...    31   7.7  

>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
          Length = 1538

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 360 PPVTPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 190
           PPVTPS   R+    S+     T   R G AR++R P+P+    C R+ S        P+
Sbjct: 708 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 767

Query: 189 R 187
           R
Sbjct: 768 R 768


>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
          Length = 1289

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 360 PPVTPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 190
           PPVTPS   R+    S+     T   R G AR++R P+P+    C R+ S        P+
Sbjct: 459 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 518

Query: 189 R 187
           R
Sbjct: 519 R 519


>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
            heparan sulfate  proteoglycan core protein protein.
          Length = 4393

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 357  PVTPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 205
            P+ P G+CR V+++I    E    GT+    R K   +   C E ++   H
Sbjct: 864  PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADRSFH 914


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,258,206
Number of Sequences: 237096
Number of extensions: 1260695
Number of successful extensions: 5382
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5381
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)