Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_F23
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   234   7e-62
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    36   0.048
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  234 bits (572), Expect = 7e-62
 Identities = 119/223 (53%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
 Frame = +3

Query: 180 LTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQTRPPRIVK 353
           L G  L+E  RI +GR       L+ SSI              +   A+ EQTR PR+V+
Sbjct: 19  LDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQTRAPRLVR 75

Query: 354 VGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQ 533
           V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPFAFCTRE+ 
Sbjct: 76  VAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERL 135

Query: 534 PWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDIPWNTAVVISDTGNVIGK 713
           PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D+ WNTAVVIS TG VIG+
Sbjct: 136 PWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVISHTGRVIGR 195

Query: 714 HRKNHIPRVGXFNESNYYMEGNTGHPVFATXYGKIXVNICFGR 842
            RKNHIPRVG FNES YYME   GHPVF T YG+I +NIC+GR
Sbjct: 196 SRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGR 238


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 35.5 bits (78), Expect = 0.048
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
 Frame = +3

Query: 411 KKAIFNKVKKIIDVAGQEGVNIICFQEL-------WN-MPFAFCTREKQPWCEFA---ES 557
           K A   KVKK ++ A   G  ++ F E        WN       TR  +   EF    E+
Sbjct: 16  KPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYPKWNSFGITMGTRTPEGRKEFKRYFEN 75

Query: 558 A--EDGPTTTFLRELAIKYAMVIVSSILERDEKHSDIPWNTAVVISDTGNVIGKHRKNHI 731
           A  E+G  +  +  LA +  + IV  ++ER+   +   + +    S +G  +GKHRK  +
Sbjct: 76  AIEENGEESKLIESLAAQNNIHIVIGVVERE---ASTLYCSVFFYSPSG-YLGKHRKL-L 130

Query: 732 PRVGXFNESNYYMEGN-TGHPVFATXYGKIXVNICF 836
           P      E   + +G+ +  PVF+T  GKI   IC+
Sbjct: 131 PTA---LERCVWGQGDGSTMPVFSTSVGKIGSAICW 163


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 718 RCFPITFPVSLMTTAVFQGMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 572
           +C P+TF ++   T +       F+++  IE+T I IA L+  +   V++
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 414 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 548
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 414 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 548
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 592 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 446
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 663 PWNTAVVISDTGNVIGKHRKNHIPRVGXFNESNYYM 770
           PWN  + + D   ++   +  H+ R G +   NY++
Sbjct: 265 PWNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 441 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 596
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 441 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 596
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,563,183
Number of Sequences: 27780
Number of extensions: 389760
Number of successful extensions: 1189
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)