Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F21
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 9e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 9e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 37 2e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 37 3e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 6e-04
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.024
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.073
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 26 0.52
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.52
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 26 0.52
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 26 0.52
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.0 bits (134), Expect = 1e-10
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + Y+P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 485 QTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGXWDV 592
QTC KFGS N D++ + +K + ++SG WD+
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
Score = 25.8 bits (54), Expect = 0.52
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 303
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.4 bits (120), Expect = 5e-09
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
V S+ +WRPD+VL N A A +A + + G V W + + ++Y+P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 485 QTCTFKFGSRMHNSDEMD 538
QTC KFGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 287 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 195
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.4 bits (120), Expect = 5e-09
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
V S+ +WRPD+VL N A A +A ++ G V W + + ++Y+P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 485 QTCTFKFGSRMHNSDEMD 538
QTC KFGS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + ++P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 485 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDV 592
Q C KFGS ++ ++D + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
Score = 22.2 bits (45), Expect = 6.3
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 222
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RIQADLQMNWIDKRLSWNAGGVG 291
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 457
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 458 QLDYWPNDMQTCTFKFGSRMHNSDEMD 538
++Y+P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.0 bits (114), Expect = 3e-08
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 284 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 457
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 458 QLDYWPNDMQTCTFKFGSRMHNSDEMD 538
+ Y+P D QTC KFGS ++ ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V++NGS ++ + + + ++P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V++NGS ++ + + + ++P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V++NGS ++ + + + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.8 bits (111), Expect = 6e-08
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPN 478
V S+ +W PD+ + N+ T G V ++GSVS + + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 479 DMQTCTFKFGSRMHNSDEMDFVIDKRIYSM---FESGXWDVTALSS 607
D C FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.8 bits (111), Expect = 6e-08
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDYWP 475
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++++P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 476 NDMQTCTFKFGSRMHNSDEMD 538
D+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 287 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 195
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V+++GS ++ + M + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V+++GS ++ + M + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 457
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 458 QLDYWPNDMQTCTFKFGSRMHNSDEMD 538
++Y+P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V+++GS ++ + + + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V+++GS ++ + + + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
++ +LW+PD+++ N+A G Y V+++GS ++ + + + ++P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 485 QTCTFKFGSRMHNSDEMDFVI 547
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDYWPND 481
V R+WRPD +L N A + V S+ G V W+ + + ++++P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 482 MQTCTFKFGSRMHNSDEMD 538
Q C K+ S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 314 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDYWPNDM 484
+E++W PD N + D R R+S +GSV++ R + M L Y+P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 485 QTCTFKFGS 511
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDYWPNDMQ 487
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 488 TCTFKFGS 511
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.1 bits (82), Expect = 2e-04
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 305 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDYWP 475
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 476 NDMQTCTFKFGSRMHNSDEMDFV 544
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 264
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 265 LSWNAGGVGLQHL 303
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.1 bits (82), Expect = 2e-04
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 305 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDYWP 475
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 476 NDMQTCTFKFGSRMHNSDEMDFV 544
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 264
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 265 LSWNAGGVGLQHL 303
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 36.7 bits (81), Expect = 3e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDYWPNDMQ 487
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 488 TCTFKFGSRMHNSDEMDFVID 550
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.7 bits (81), Expect = 3e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 320 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDYWPNDMQT 490
R+W+PD N + T R+ +G V + RL I M L+ +P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 491 CTFKFGS 511
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAG 282
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 290 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 442
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 443 TPISMQLDYWPNDMQTCTFKFGS 511
M L Y+P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 290 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 442
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 443 TPISMQLDYWPNDMQTCTFKFGS 511
M L Y+P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 243
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNA 279
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDYWPN 478
V S +W PD+V+ ++ + D ++ V N+G++ + + +WP
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPY 168
Query: 479 DMQTCTFKFGSRMHNSDEM 535
D+ CT S H S+E+
Sbjct: 169 DILNCTIHIASWSHGSNEI 187
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 290 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 442
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 443 TPISMQLDYWPNDMQTCTFKFGS 511
M L Y+P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.5 bits (78), Expect = 6e-04
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 323 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDYWPNDMQTC 493
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + +P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 494 TFKFGSRMHNSDEMDFV 544
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.3 bits (65), Expect = 0.024
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 323 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDYWPNDMQTC 493
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 494 TFKFGSRMHNSDEM 535
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.073
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDYWPND 481
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 482 MQTCTFKFGSRMHNSDEM 535
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 392 RVSNNGSVSWIKRLDISTPISMQLDYWPNDMQTCTFKFGSRMHNSDEMDFV 544
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 392 RVSNNGSVSWIKRLDISTPISMQLDYWPNDMQTCTFKFGSRMHNSDEMDFV 544
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 392 RVSNNGSVSWIKRLDISTPISMQLDYWPNDMQTCTFKFGSRMHNSDEMDFV 544
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 392 RVSNNGSVSWIKRLDISTPISMQLDYWPNDMQTCTFKFGSRMHNSDEMDFV 544
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 157 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 324
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 325 V 327
+
Sbjct: 299 I 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,776
Number of Sequences: 438
Number of extensions: 4857
Number of successful extensions: 79
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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