Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F20
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 54 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 9e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 1e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 50 4e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 45 8e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 40 3e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.024
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.032
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.68
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.2 bits (132), Expect = 2e-10
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 368
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 369 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTF 536
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 537 TFG 545
FG
Sbjct: 168 KFG 170
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +3
Query: 147 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 326
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 327 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQL 500
G ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 501 DXWPNDMQTCTFTFG 545
+P D Q C FG
Sbjct: 184 TWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +3
Query: 147 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 326
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 327 -GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQL 500
G ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 501 DXWPNDMQTCTFTFG 545
+P D Q C FG
Sbjct: 184 TWFPFDDQHCDMKFG 198
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 368
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 369 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFTFG 545
PD+VL N A A +A + + G V W + + ++ +P D QTC FG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 449
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 450 VSWIKRLDISTPISMQLDXWPNDMQTCTFTFG 545
V W + + ++ +P D QTC FG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Frame = +3
Query: 198 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 365
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 366 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFTF 542
PD+VL N A G + +A + G V W + + + +P D QTC F
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 543 G 545
G
Sbjct: 164 G 164
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 338
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 339 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPF 120
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 121 DDQHCDMKFG 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 368
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 369 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTF 536
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 537 TFG 545
G
Sbjct: 170 KLG 172
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +3
Query: 162 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 341
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 342 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 515
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 516 DMQTCTFTFG 545
D Q C FG
Sbjct: 158 DDQRCEMKFG 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 53.2 bits (122), Expect = 3e-09
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 440
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 441 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFTFG 545
G VSW + + ++ +P D Q+C FG
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFG 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.6 bits (118), Expect = 9e-09
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +3
Query: 165 RTIGTPPPXSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 338
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 339 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDX 506
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 507 WPNDMQTCTFTFG 545
+P D QTC FG
Sbjct: 152 FPFDEQTCFMKFG 164
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 198 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 374
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 375 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 530
+L N A + VS+ G V W+ + + ++ +P D Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.6 bits (113), Expect = 4e-08
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +3
Query: 237 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 407
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFTFG 545
R+ +G V + RL I M L+ +P D Q C FG
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = +3
Query: 180 PPPXSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 350
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 351 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 521
S+ +W PD+ + N+ T G V ++GSVS + + + WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 522 QTCTFTFG 545
C FG
Sbjct: 181 HRCRINFG 188
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +3
Query: 237 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 416
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 417 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFTFG 545
+ R+S +G + + RL I M+L +P D Q+C G
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILG 181
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.8 bits (101), Expect = 1e-06
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 180 PPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 356
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 357 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 530
+W PD+V+ + + ++ V N+G++ + + WP D+ C
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
Query: 531 T 533
T
Sbjct: 174 T 174
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = +3
Query: 201 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 371
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 372 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 533
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCS 175
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +3
Query: 237 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 416
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 417 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 533
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.9 bits (89), Expect = 3e-05
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +3
Query: 201 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 371
VV + + +R + I + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 372 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 533
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCS 175
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXWPNDMQTCTF 536
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXWPNDMQTCTF 536
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXWPNDMQTCTF 536
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = +3
Query: 174 GTPPPXSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 350
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 351 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 503
SE +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 504 XWPNDMQTC 530
+P D Q C
Sbjct: 144 YFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 441 NGSVSWIKRLDISTPISMQLDXWPNDMQTC 530
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 441 NGSVSWIKRLDISTPISMQLDXWPNDMQTC 530
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.003
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +3
Query: 198 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 371
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 372 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTF 536
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.3 bits (65), Expect = 0.024
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 198 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 359
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 360 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDMQ 524
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 525 TC 530
C
Sbjct: 129 IC 130
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.9 bits (64), Expect = 0.032
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 407
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 408 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 533
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 524
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 525 TC 530
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 341 PSAAAPLPCVPTQS 300
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,775
Number of Sequences: 438
Number of extensions: 4342
Number of successful extensions: 88
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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