Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F16
(901 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 41 0.003
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 41 0.003
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 41 0.003
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 41 0.003
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 41 0.003
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 40 0.004
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 40 0.005
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 40 0.006
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 39 0.008
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 39 0.008
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 39 0.008
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 39 0.008
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 39 0.011
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 39 0.011
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 39 0.011
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 38 0.019
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 38 0.019
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 38 0.019
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 38 0.019
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 38 0.019
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 38 0.019
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 37 0.033
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 37 0.033
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 37 0.033
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 37 0.033
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 36 0.057
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 36 0.057
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 36 0.057
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 36 0.057
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 36 0.076
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 36 0.076
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 36 0.076
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 36 0.076
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 36 0.076
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 36 0.100
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 36 0.100
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 36 0.100
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 36 0.100
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 36 0.100
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 36 0.100
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 36 0.100
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.100
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 36 0.100
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 36 0.100
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 31 2.8
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 31 2.8
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 31 2.8
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 31 2.8
BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p pro... 29 6.6
AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-P... 29 6.6
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Frame = +2
Query: 191 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 358
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 359 RPDVVLLNXXXXXXXXXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TI----WPNDMQTC 526
PD+VL N WT F S I +P D QTC
Sbjct: 128 LPDIVLYNNADGEYVVTTMTKAILHYTGKV----VWTPPAIFKSSCEIDVRYFPFDQQTC 183
Query: 527 TFKFG 541
KFG
Sbjct: 184 FMKFG 188
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Frame = +2
Query: 191 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 358
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 359 RPDVVLLNXXXXXXXXXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TI----WPNDMQTC 526
PD+VL N WT F S I +P D QTC
Sbjct: 128 LPDIVLYNNADGEYVVTTMTKAILHYTGKV----VWTPPAIFKSSCEIDVRYFPFDQQTC 183
Query: 527 TFKFG 541
KFG
Sbjct: 184 FMKFG 188
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Frame = +2
Query: 191 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 358
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 359 RPDVVLLNXXXXXXXXXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TI----WPNDMQTC 526
PD+VL N WT F S I +P D QTC
Sbjct: 128 LPDIVLYNNADGEYVVTTMTKAILHYTGKV----VWTPPAIFKSSCEIDVRYFPFDQQTC 183
Query: 527 TFKFG 541
KFG
Sbjct: 184 FMKFG 188
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Frame = +2
Query: 191 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 358
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 359 RPDVVLLNXXXXXXXXXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TI----WPNDMQTC 526
PD+VL N WT F S I +P D QTC
Sbjct: 128 LPDIVLYNNADGEYVVTTMTKAILHYTGKV----VWTPPAIFKSSCEIDVRYFPFDQQTC 183
Query: 527 TFKFG 541
KFG
Sbjct: 184 FMKFG 188
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Frame = +2
Query: 191 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 358
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 359 RPDVVLLNXXXXXXXXXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TI----WPNDMQTC 526
PD+VL N WT F S I +P D QTC
Sbjct: 128 LPDIVLYNNADGEYVVTTMTKAILHYTGKV----VWTPPAIFKSSCEIDVRYFPFDQQTC 183
Query: 527 TFKFG 541
KFG
Sbjct: 184 FMKFG 188
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 40.3 bits (90), Expect = 0.004
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 158 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 331
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 332 WLVSSERLWRPDVVLLN 382
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWHPDIVLYN 115
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 188 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 361
K+ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 362 PDVVLLN 382
PD+VL N
Sbjct: 125 PDIVLYN 131
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 158 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 331
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 332 WLVSSERLWRPDVVLLN 382
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWLPDIVLYN 115
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 97
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 39.1 bits (87), Expect = 0.008
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXX 403
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 125
Query: 404 XXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TIWPNDMQTCTFKFG 541
T +P D QTC KFG
Sbjct: 126 VRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 171
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 38.7 bits (86), Expect = 0.011
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXX 403
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 125
Query: 404 XXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TIWPNDMQTCTFKFG 541
T +P D QTC KFG
Sbjct: 126 VRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 171
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 38.7 bits (86), Expect = 0.011
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXX 403
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 125
Query: 404 XXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TIWPNDMQTCTFKFG 541
T +P D QTC KFG
Sbjct: 126 VRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 171
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 38.7 bits (86), Expect = 0.011
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNXXXXXXX 403
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 125
Query: 404 XXXXXXXXXXXXXXXXX*SAWTXALQFLCS*TIWPNDMQTCTFKFG 541
T +P D QTC KFG
Sbjct: 126 VRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 171
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 129
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 37.9 bits (84), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 132
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.033
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 331
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 332 WLVSSERLWRPDVVLLN 382
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.033
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 331
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 332 WLVSSERLWRPDVVLLN 382
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.033
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 331
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 332 WLVSSERLWRPDVVLLN 382
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.033
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 331
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 332 WLVSSERLWRPDVVLLN 382
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 36.3 bits (80), Expect = 0.057
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 36.3 bits (80), Expect = 0.057
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.057
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 36.3 bits (80), Expect = 0.057
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 382
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.076
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 35.9 bits (79), Expect = 0.076
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 402
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 35.9 bits (79), Expect = 0.076
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 354
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.076
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.076
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 134
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.100
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 382
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 230 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 382
I E + T + + +W+DKRL++ + + + R+W+PD N
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 179 PXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERL 355
P + ++ R ++ S ++ + M+W D RL W ++G ++ R+
Sbjct: 36 PANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRI 95
Query: 356 WRPDVVLLN 382
W+P + +LN
Sbjct: 96 WKPHMNVLN 104
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 230 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 382
I E + T + + +W+DKRL++ + + + R+W+PD N
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 179 PXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERL 355
P + ++ R ++ S ++ + M+W D RL W ++G ++ R+
Sbjct: 233 PANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRI 292
Query: 356 WRPDVVLLN 382
W+P + +LN
Sbjct: 293 WKPHMNVLN 301
>BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p
protein.
Length = 573
Score = 29.5 bits (63), Expect = 6.6
Identities = 30/114 (26%), Positives = 50/114 (43%)
Frame = -3
Query: 398 RWLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVSARWTRTHEC*HV 219
R PRLA A++S P PA+ + +S+S S S PV +R+ +
Sbjct: 305 RQRDPRLARQMHAASSHPAAPARNDPRLEAKSSSSQKSSRSRSKSPVRNSSSRSGKSGSS 364
Query: 218 SNAGSG*LRFWSXGGDSRSYVARSESIMRDSDVAFSHSAAPAIAQVRRNGNKNN 57
S++ S R S S + + S S +R V S S P + + + +K++
Sbjct: 365 SHSSSS-SRERSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVKRSGKITSKDS 417
>AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-PA
protein.
Length = 1945
Score = 29.5 bits (63), Expect = 6.6
Identities = 30/114 (26%), Positives = 50/114 (43%)
Frame = -3
Query: 398 RWLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVSARWTRTHEC*HV 219
R PRLA A++S P PA+ + +S+S S S PV +R+ +
Sbjct: 305 RQRDPRLARQMHAASSHPAAPARNDPRLEAKSSSSQKSSRSRSKSPVRNSSSRSGKSGSS 364
Query: 218 SNAGSG*LRFWSXGGDSRSYVARSESIMRDSDVAFSHSAAPAIAQVRRNGNKNN 57
S++ S R S S + + S S +R V S S P + + + +K++
Sbjct: 365 SHSSSS-SRKRSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVKRSGKITSKDS 417
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,891,572
Number of Sequences: 53049
Number of extensions: 709130
Number of successful extensions: 1763
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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