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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_F14
         (913 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    50   3e-08
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    47   3e-07
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    45   1e-06
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    44   1e-06
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    44   2e-06
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    44   3e-06
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    43   3e-06
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    43   3e-06
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    42   6e-06
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    42   6e-06
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    42   6e-06
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    42   6e-06
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    42   6e-06
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    42   6e-06
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    42   6e-06
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    42   1e-05
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    40   4e-05
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    39   5e-05
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    39   7e-05
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    32   0.008
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    31   0.015
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    30   0.034
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.9  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 50.0 bits (114), Expect = 3e-08
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
 Frame = +1

Query: 61  IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 219
           I SA  C        + D LL+ Y+R   P S     +VV L L L      N+++   T
Sbjct: 9   ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68

Query: 220 VRILADLQMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
             +   L+  W D +  W+  E+G  T L V SE +W PD+VL N A
Sbjct: 69  TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 46.8 bits (106), Expect = 3e-07
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
 Frame = +1

Query: 49  LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 207
           ++C +A        +    + D LL+ Y+R   P      ++ V + L L      N++ 
Sbjct: 5   ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64

Query: 208 SESTVRILADLQMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 357
              T  +   ++  W D +L WN  ++G   T  V SE +W PD+VL N A
Sbjct: 65  QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 44.8 bits (101), Expect = 1e-06
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
 Frame = +1

Query: 79  CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 243
           C++ TS S +      L   YDR+  P+ K    ++  L ++H N+ E   TV     L+
Sbjct: 28  CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87

Query: 244 MNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVL 345
           + W    L+W + E+   ++  V S  +W PD+V+
Sbjct: 88  LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
 Frame = +1

Query: 79  CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 237
           C        + D LL+ Y++   P   +   LT+ ++         N++    T  +   
Sbjct: 19  CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76

Query: 238 LQMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
           ++ +W D +L W+  E+G    L V S+ +WRPD+VL N A
Sbjct: 77  VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTPG 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A     
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84

Query: 373 GLRSXAPGVSXNG 411
           G    +  V+ NG
Sbjct: 85  GTYQTSVVVTHNG 97


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = +1

Query: 106 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDXRLS 270
           + D LL+ Y+R   P       LT  L L+ + + E     +++     ++  W D +L 
Sbjct: 37  LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96

Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
           WN  E+G    L V SE +W PD+VL N A
Sbjct: 97  WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 43.2 bits (97), Expect = 3e-06
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
 Frame = +1

Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLS 270
           +++ LL++Y+    P       + V   + L+   ++ E    +   A L++ W+D  L 
Sbjct: 58  LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117

Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTPGGLRSXAPGVSXNG 411
           WN  E+ G     ++  +LW+PD+++ N+A     G       V+ NG
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNG 165


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 43.2 bits (97), Expect = 3e-06
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
 Frame = +1

Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLS 270
           +++ LL++Y+    P       + V   + L+   ++ E    +   A L++ W+D  L 
Sbjct: 58  LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117

Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTPGGLRSXAPGVSXNG 411
           WN  E+ G     ++  +LW+PD+++ N+A     G       V+ NG
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNG 165


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 357
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 357
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 357
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 357
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 196 NIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 357
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +1

Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDXRLS 270
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
           W   E+G    L V S+ +WRPD+VL N A
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +1

Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDXRLS 270
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
           W   E+G    L V S+ +WRPD+VL N A
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 41.5 bits (93), Expect = 1e-05
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +1

Query: 85  NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 252
           N +++S ++D+LL  YD    PD       V + + +R    I E + T  +    + +W
Sbjct: 2   NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61

Query: 253 IDXRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 351
           +D RL++  G+   +  +    R+W+PD    N
Sbjct: 62  VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
 Frame = +1

Query: 37  YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 201
           +  +   A+A++      +    +++ LL TY+  E P  ++   +V++  L L    ++
Sbjct: 4   WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63

Query: 202 RESESTVRILADLQMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 357
            E    +     L++ W D  + WN  ++G    L +   RLW+PDV++ N+A
Sbjct: 64  DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 160 IVVNLTLHLRHANIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPD 336
           +V  L+LH    ++ E    +     +   W D  L WNA E+ G     V   R+WRPD
Sbjct: 33  VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91

Query: 337 VVLLNAA 357
            +L N A
Sbjct: 92  TILYNNA 98


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 38.7 bits (86), Expect = 7e-05
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 157 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDXRLSWNAGEW-GCSTWLVSSERLWR 330
           K+ VN  L  ++  N+ E    ++    L+  W D +L W+  ++ G     +  +++W+
Sbjct: 51  KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110

Query: 331 PDVVLLNAA 357
           PD+VL N A
Sbjct: 111 PDIVLFNNA 119


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 31.9 bits (69), Expect = 0.008
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
 Frame = +1

Query: 94  SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 258
           ++++++++LL  Y+    P     +  VV   + +R    + E +    +    + +W D
Sbjct: 36  NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95

Query: 259 XRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 351
            RLS+       S  +   ER+WRPD    N
Sbjct: 96  SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 31.1 bits (67), Expect = 0.015
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
 Frame = +1

Query: 85  NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
           N  ++S ++DS   +YD+   P+     + V +T++ L  +++ E +    +    +  W
Sbjct: 8   NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67

Query: 253 IDXRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 351
            D RL++     G  T  V SE    +W PD   +N
Sbjct: 68  TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 0.034
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
 Frame = +1

Query: 85  NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
           N  ++S ++DS   +YD+   P+     + V +T++ L  +++ E      +    +  W
Sbjct: 8   NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67

Query: 253 IDXRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 351
            D RL++     G  T  V SE    +W PD   +N
Sbjct: 68  TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 102 GQ*CCVFAFCRTSYSTSEEKXVTE 31
           G+ CC   F  T Y   + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 303 PSAAAPFPCVPTQS 262
           PSA AP P +P  S
Sbjct: 411 PSAGAPMPPIPNMS 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,363
Number of Sequences: 438
Number of extensions: 3133
Number of successful extensions: 45
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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