Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F10
(908 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 65 7e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 4e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 4e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 7e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 5e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.025
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.025
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.18
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 5.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 65.3 bits (152), Expect = 7e-13
Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRILADLQMNWIDKRLSWNAGEWGCRTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+ G V W + + + +P D QTC KFG
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFG 164
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGCRTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 438
+D+RL++ G+ + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDISTPISMQLDNWPNDMQTCTFKFGFY 528
RL I M L+N+P D Q C +FG +
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSF 151
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGCRTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
V W + + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 4e-11
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCRTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 459
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 460 PISMQLDNWPNDMQTCTFKFG 522
+ ++ +P D QTC KFG
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFG 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.4 bits (135), Expect = 8e-11
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 286 WNAGEWGCRTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 450
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 451 ISTPISMQLDNWPNDMQTCTFKFG 522
+ + ++ +P D Q+C KFG
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFG 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 58.0 bits (134), Expect = 1e-10
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRILADLQMNWIDKRLSWNAGEWG-CRTWLVSSERLWRPDVVLLNAAATTAGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+A + + G V W + + ++ +P D QTC KFG
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFG 164
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 459
WN E+ G + ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDNWPNDMQTCTFKFG 522
+ + +P D Q C KFG
Sbjct: 178 TCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 459
WN E+ G + ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDNWPNDMQTCTFKFG 522
+ + +P D Q C KFG
Sbjct: 178 TCKIDITWFPFDDQHCDMKFG 198
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.2 bits (132), Expect = 2e-10
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCRTWL-VSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 KFG 522
KFG
Sbjct: 168 KFG 170
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.2 bits (132), Expect = 2e-10
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCRTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 451 ISTPISMQLDNWPNDMQTCTFKFG 522
+ S+ ++ +P D+QTC K G
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLG 172
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.8 bits (131), Expect = 3e-10
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.0 bits (129), Expect = 4e-10
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RILADLQMNWIDKRLSWNAGEWG-CRTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARV 411
L++ W D + WN ++G R + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
NNG+ ++ + + + +P D Q C KFG
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G + ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCRTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G R V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 519
+L N A + VS+ G V W+ + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.6 bits (113), Expect = 4e-08
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 258
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 429
+ W L+W + E+ + V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 430 SWIKRLDISTPISMQLDN--WPNDMQTCT 510
+ TP+ + D+ WP D+ CT
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 49.2 bits (112), Expect = 5e-08
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 264
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLSWNAGEW-GCRTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 432
W D LSW ++ G V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 433 WIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+ + + +WP D C FG
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFG 188
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 7e-08
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 273
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGCRTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
RLS+ + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDISTPISMQLDNWPNDMQTCTFKFG 522
L I M+L N+P D Q+C G
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILG 181
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 2e-07
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWNAGEWGCRT---WLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK 441
L +N ++G R L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFN--DFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSI 152
Query: 442 RLDISTPISMQLDNWPNDMQTCTFKFGFY 528
R+ ++ M L +P D Q C+ + Y
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 5e-07
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCRTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWPNDMQTC 507
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LSWNAGEWGCRT---WLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK 441
L +N ++G R L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFN--DFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSI 152
Query: 442 RLDISTPISMQLDNWPNDMQTCTFKFGFY 528
R+ ++ M L +P D Q C+ + Y
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCRTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWPNDMQTC 507
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Frame = +1
Query: 124 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 291
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 292 AGEWGCRTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 462
E +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 463 ISMQLDNWPNDMQTCTFKFGFY 528
M L +P D Q CT + Y
Sbjct: 161 CMMDLHYYPLDSQNCTVEIESY 182
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCRTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGCRTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 WIKRLDISTPISMQLDNWPNDMQTCTF 513
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGCRTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 WIKRLDISTPISMQLDNWPNDMQTCTF 513
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGCRTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 WIKRLDISTPISMQLDNWPNDMQTCTF 513
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.025
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 175 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCRTWLVSSERLWRP 348
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 349 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.3 bits (65), Expect = 0.025
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 258
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 259 MNWIDKRLSW--NAGEWGCRTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNG 423
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 424 SVSWIKRLDISTPISMQLDNWPNDMQTCT 510
++ ++ +L + +M+ +++P+D Q C+
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.18
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 495
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 496 MQTC 507
+Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 502 TC 507
C
Sbjct: 176 EC 177
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 5.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 394 RSPRRWLQPRLAVPRQASTSVPRTPAKCGSPIPLRSNSV 278
R+ RR PRLA S A G P+P R V
Sbjct: 1334 RNSRRTPVPRLAQDSSEDESYRGPSASGGRPVPERPERV 1372
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 318 PSAAAPFPCVPTQS 277
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,335
Number of Sequences: 438
Number of extensions: 4216
Number of successful extensions: 82
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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