Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F06
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 45 6e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 45 6e-05
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 41 0.001
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 39 0.005
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 38 0.007
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 38 0.009
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 38 0.009
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 37 0.016
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 37 0.016
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 37 0.016
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 37 0.016
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 37 0.016
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 37 0.016
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 37 0.021
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 37 0.021
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 36 0.027
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 36 0.027
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 36 0.027
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 36 0.036
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 36 0.036
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 36 0.036
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 36 0.036
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 36 0.036
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 36 0.036
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 36 0.036
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 36 0.036
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 36 0.036
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 35 0.063
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 35 0.084
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 35 0.084
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 35 0.084
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 35 0.084
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 34 0.11
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.11
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.15
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.15
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.15
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 33 0.19
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 33 0.34
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 33 0.34
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 33 0.34
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 32 0.45
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 32 0.45
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 32 0.45
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 32 0.45
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 0.78
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 31 0.78
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 31 0.78
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 31 1.0
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 31 1.0
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 31 1.0
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 31 1.0
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 31 1.0
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.0
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 31 1.4
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 31 1.4
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 30 1.8
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 29 5.5
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 7.3
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 28 7.3
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 28 9.6
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L M W D +L+WN E+G S V S+R+W PD+VL N A
Sbjct: 113 LTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 45.2 bits (102), Expect = 6e-05
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L +NW+D RLSWN W + R+W+PD++L+N A
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L M W D +L+WN E+G S V S+R+W PD+VL N A
Sbjct: 113 LTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAA 395
L M W D +L+WN +W G + S+++W PD+VL N A
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNA 121
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L M W D RL W+ G WG V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCST-XXVSSERLWRPDVVLLNAA 395
L +W+D RLSWN E+G T E LW PD++L N A
Sbjct: 58 LIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNA 98
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAA 398
L M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 90 LEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAA 398
L M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 90 LEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWG------CSTXXVSSERLWRPDVVLLNAAAPTV-GDYAL 422
ILA + +W D +L+W+ +G S +S +LWRPDV+L N+ + + Y+
Sbjct: 69 ILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSVSESFDSTYSS 128
Query: 423 RARVSNNG 446
R VS+NG
Sbjct: 129 RFIVSSNG 136
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAAAPTVGD-YALRARVSNNGL 449
L +W+D L W ++G T +LW PDV++ N+A P YA V NGL
Sbjct: 78 LKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYNSADPQFDSRYASNLLVYPNGL 137
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTV--GDYALRARVSNNG 446
L + WID L+W+ ++G S V + ++W+PDV++ N A V + A V N G
Sbjct: 82 LELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTG 141
Query: 447 LRLL 458
+L
Sbjct: 142 RVML 145
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTV--GDYALRARVSNNG 446
L + WID L+W+ ++G S V + ++W+PDV++ N A V + A V N G
Sbjct: 82 LELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTG 141
Query: 447 LRLL 458
+L
Sbjct: 142 RVML 145
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L WID +LSW+ +G + V E +W PD+VL N A
Sbjct: 79 LKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNA 119
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L WID +LSW+ +G + V E +W PD+VL N A
Sbjct: 79 LKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNA 119
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L WID +LSW+ +G + V E +W PD+VL N A
Sbjct: 79 LKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNA 119
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTV-GDYALRARVSNNG 446
W D +L W+ E+G +T + LW+PD++L N+A + + VS+NG
Sbjct: 81 WNDYKLRWSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNG 135
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L +W+D +L W+ E+G V S+ +W PDVVL N A
Sbjct: 79 LQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYNNA 119
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L +W+D +L W+ E+G V S+ +W PDVVL N A
Sbjct: 79 LQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYNNA 119
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 282 MNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAA 395
M W D ++ W+ E+ G T V +++W PD+VL N A
Sbjct: 81 MKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 282 MNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAA 395
M W D ++ W+ E+ G T V +++W PD+VL N A
Sbjct: 81 MKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L + W D ++ WN +G VS +++W PD+VL N A
Sbjct: 83 LTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLPDIVLFNNA 123
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L + W D ++ WN +G VS +++W PD+VL N A
Sbjct: 83 LTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLPDIVLFNNA 123
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAA 395
L + W D ++ WN +G VS +++W PD+VL N A
Sbjct: 83 LTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLPDIVLFNNA 123
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAA 395
L M W D +L W+ ++ T V+ E++W PD+VL N A
Sbjct: 91 LTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAA 395
L M W D +L W+ ++ T V+ E++W PD+VL N A
Sbjct: 91 LTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAA 395
L M W D +L W+ ++ T V+ E++W PD+VL N A
Sbjct: 91 LTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNA 131
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARV 434
W D L+WN ++G + V SE +W+PD+++ N A + + ++ V
Sbjct: 81 WQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNV 130
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARV 434
W D L+WN ++G + V SE +W+PD+++ N A + + ++ V
Sbjct: 81 WQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNV 130
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARV 434
W D L+WN ++G + V SE +W+PD+++ N A + + ++ V
Sbjct: 65 WQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNV 114
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 228 MLXFVRSESXXRILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNA 392
++ V E L D W D RL WN E+ G S V +W P+V + +A
Sbjct: 65 LVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRMIWLPEVTIADA 120
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXXVSS-ERLWRPDV 377
L ++W D RL WN EW + S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXXVSS-ERLWRPDV 377
L ++W D RL WN EW + S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 228 MLXFVRSESXXRILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAAAPT 404
++ V E L D +W D RLSW+ ++ G + V ++W P+ +++ +
Sbjct: 93 LVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSKVWIPETTIVDCSEIK 152
Query: 405 VGD--YALRARVSNNG 446
V D Y A + +NG
Sbjct: 153 VFDNEYTRYAWLHSNG 168
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
L M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXXV---SSERLWRPDVVLLNAAA 398
L W D +L W ++G SS+ +W+PDV+L N+AA
Sbjct: 78 LSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAA 121
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
L M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 34.7 bits (76), Expect = 0.084
Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAA 395
+ ++W+D +L W+ + + + S+++W+PD++L N A
Sbjct: 52 IRLHWVDYKLVWDPRLYQNVTRIHIPSDKIWKPDIILYNNA 92
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.11
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 261 RILADLXMNWIDXRLSWNAGEWGCSTXXVSSERLWRPDVVLLNAAA 398
++ ++W D +SW+ +WG S ++W P++V +N +
Sbjct: 106 KVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGS 151
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXXVSSERLWRPDVVLLNAA 395
L +W D L W ST ++S +LW+P + L N+A
Sbjct: 79 LMASWTDEYLKWERKATNISTLSIASSKLWQPALQLYNSA 118
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Frame = +3
Query: 261 RILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARVS 437
+IL +W D L+W+ EW G + ++W PD + N T ARV
Sbjct: 83 KILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVR 142
Query: 438 NNGLRLLS*RAWTSNTPXPMPXXXWPXXXXTCXFXSGS 551
+G + T PM +P C GS
Sbjct: 143 YDGRVEVDFNKLVDLT-CPMSVLSFPFDVQLCALQFGS 179
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Frame = +3
Query: 261 RILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARVS 437
+IL +W D L+W+ EW G + ++W PD + N T ARV
Sbjct: 83 KILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVR 142
Query: 438 NNGLRLLS*RAWTSNTPXPMPXXXWPXXXXTCXFXSGS 551
+G + T PM +P C GS
Sbjct: 143 YDGRVEVDFNKLVDLT-CPMSVLSFPFDVQLCALQFGS 179
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCST-XXVSSERLWRPDV 377
++ ++ W D RLSWNA W +T + +++W P +
Sbjct: 95 VVMEIMEYWYDARLSWNASAWQNTTMIYMKQDKVWSPTI 133
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +3
Query: 228 MLXFVRSESXXRILADLXMNWIDXRLSWN--AGEWGCSTXXVSSERLWRPDVVLLNA--A 395
+L +++ + + + W D L WN A + +S+ R W PDV+ N
Sbjct: 62 LLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTNGIDM 121
Query: 396 APTVGDYALRARVSNNGLRLLS*RAWTSNTPXPMPXXXWPXXXXTCXFXSGS 551
P + A + NG + + R ++P P+ +P C GS
Sbjct: 122 DPLLDKDMQMADLRYNG-EIRTSRPAVVSSPCPLEIDNFPYDVQKCNISMGS 172
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 288 WIDXRLSWNAGEWGCSTXXVSSERLWRPDVVLLNAA 395
WID + W+A + + +S+ LW+P + L N+A
Sbjct: 83 WIDEYMQWDAKKENVTKLTISAHSLWQPALALYNSA 118
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAAAPTVGDYALR--ARV 434
+L + +W+D L+W+ +G T + +++W PD+++ N A A+R AR+
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARI 170
Query: 435 SNNG 446
NG
Sbjct: 171 HYNG 174
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEW-GCSTXXV--SSERLWRPDVVLLNAA 395
++A + W D +L W+ E+ G + ++ +W+PDV+L N+A
Sbjct: 76 LVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIWKPDVLLYNSA 122
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 249 ESXXRILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRP 371
E ++ +L W D RLSWN+ + T V E++W P
Sbjct: 92 EEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 249 ESXXRILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRP 371
E ++ +L W D RLSWNA ++ + E++W P
Sbjct: 91 EEQVSVVLELMEYWYDPRLSWNASDYKNVTAIFTRQEKIWSP 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAAAPTVGDYALR--ARV 434
+L + +W+D L+W+ +G T + +++W PD+++ N A A+R AR+
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARI 170
Query: 435 SNNG 446
NG
Sbjct: 171 HYNG 174
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNAAAPTVGDYALR--ARV 434
+L + +W+D L+W+ +G T + +++W PD+++ N A A+R AR+
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARI 170
Query: 435 SNNG 446
NG
Sbjct: 171 HYNG 174
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNA 392
L W D L W+ E+G T + ++W+PDV+L N+
Sbjct: 75 LDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNA 392
L W D L W+ E+G T + ++W+PDV+L N+
Sbjct: 75 LDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNA 392
L W D L W+ E+G T + ++W+PDV+L N+
Sbjct: 75 LDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLNA 392
L W D L W+ E+G T + ++W+PDV+L N+
Sbjct: 75 LDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRP 371
++ +L W D RLSWN + ST E++W P
Sbjct: 97 VVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG--CSTXXVSSE-RLWRPDVVLLNAAA 398
W+D RL W+ ++ S E ++WRPD++L N+A+
Sbjct: 22 WMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSAS 61
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 261 RILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLN 389
++L + W D LSW E+ G + +W PD+++ N
Sbjct: 113 QVLVYIVQQWTDASLSWKVEEFRGIKHTWLPEHSIWIPDIIVFN 156
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLN 389
+L + +W+D L+W+ +G T + +++W PD+++ N
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFN 153
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
+ W D L WN E+G ++ + LW PD L N+
Sbjct: 105 MIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
+ W D L WN E+G ++ + LW PD L N+
Sbjct: 105 MIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
+ W D L WN E+G ++ + LW PD L N+
Sbjct: 105 MIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYLYNS 144
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLN 389
+L + +W+D L+W+ +G T + +++W PD+++ N
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 ILADLXMNWIDXRLSWNAGEWGCSTXX-VSSERLWRPDVVLLN 389
+L + +W+D L+W+ +G T + +++W PD+++ N
Sbjct: 111 VLIYVDEHWVDPSLTWDPALFGGITKTWIPLDKIWVPDIIVFN 153
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWGCSTXXVSSERLWRPDVVLLNA 392
L M W D RL+ N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG--CSTXXVSSERLWRPDVVLLN 389
W D RL WN ++ S +++W+PD++L N
Sbjct: 87 WTDFRLRWNPLDYENITSVRFQGEDQIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 288 WIDXRLSWNAGEWG--CSTXXVSSERLWRPDVVLLN 389
W D RL WN ++ S +++W+PD++L N
Sbjct: 87 WTDFRLRWNPLDYENITSVRFQGEDQIWQPDILLYN 122
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 RILADLXMNWIDXRLSWNAGEW-GCSTXXVSSERLWRPDVVLLNAAAPTVGDYALRARVS 437
++L +W D L W+ EW G + +W PD + N T RV
Sbjct: 76 KLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTLDNHNVRVH 135
Query: 438 NNG 446
NG
Sbjct: 136 YNG 138
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 276 LXMNWIDXRLSWNAGEWG-CSTXXVSSERLWRPDVVLLNA 392
+ +W D L WN ++G + V ++W PD L N+
Sbjct: 158 MVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDTYLYNS 197
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = +3
Query: 246 SESXXRILADLXMNWIDXRLSWNAGEWGCSTXXVSSERLWRPDVVL 383
+E ++ + W D L WN ++ + + LW PD +
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNITWLKLKESFLWTPDTTV 115
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 246 SESXXRILADLXMN--WIDXRLSWN--AGEWGCSTXXVSSERLWRPDVVLLNAAAPTV 407
SE +AD+ + W D RL + + + S SERLW P+V +N+ + V
Sbjct: 73 SEISSSFIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKSTQV 130
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/46 (21%), Positives = 18/46 (39%)
Frame = +3
Query: 246 SESXXRILADLXMNWIDXRLSWNAGEWGCSTXXVSSERLWRPDVVL 383
+E + + W D L WN ++ + + LW PD +
Sbjct: 70 AEETINFSGEFILQWKDEFLFWNKSDYNITWLKLKESFLWTPDTTV 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,875,886
Number of Sequences: 27780
Number of extensions: 216103
Number of successful extensions: 494
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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