Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_F04
(845 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 280 1e-75
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 280 1e-75
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 280 1e-75
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 280 1e-75
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 280 1e-75
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 167 2e-41
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 138 7e-33
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB... 31 2.6
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA... 31 2.6
BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p pro... 29 6.1
AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-P... 29 6.1
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 280 bits (687), Expect = 1e-75
Identities = 127/200 (63%), Positives = 149/200 (74%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 74 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 133
Query: 399 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 578
Y W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 134 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 193
Query: 579 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGXGYKXCHFSXGTQRSYP 758
IQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVTKG G+K T++ P
Sbjct: 194 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LP 252
Query: 759 XKTHKGLRKVACIGAWHPSR 818
KTHKGLRKVACIGAWHPSR
Sbjct: 253 RKTHKGLRKVACIGAWHPSR 272
Score = 167 bits (407), Expect = 1e-41
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +2
Query: 26 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 205
+ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69
Query: 206 EPDRPGSKINKKEIVEAVTIIETPP 280
E DRPGSKINKKE+VEAVT++ETPP
Sbjct: 70 EADRPGSKINKKEVVEAVTVLETPP 94
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 280 bits (687), Expect = 1e-75
Identities = 127/200 (63%), Positives = 149/200 (74%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 399 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 578
Y W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 579 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGXGYKXCHFSXGTQRSYP 758
IQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVTKG G+K T++ P
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LP 241
Query: 759 XKTHKGLRKVACIGAWHPSR 818
KTHKGLRKVACIGAWHPSR
Sbjct: 242 RKTHKGLRKVACIGAWHPSR 261
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +2
Query: 32 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPP 280
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 280 bits (687), Expect = 1e-75
Identities = 127/200 (63%), Positives = 149/200 (74%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 399 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 578
Y W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 579 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGXGYKXCHFSXGTQRSYP 758
IQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVTKG G+K T++ P
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LP 228
Query: 759 XKTHKGLRKVACIGAWHPSR 818
KTHKGLRKVACIGAWHPSR
Sbjct: 229 RKTHKGLRKVACIGAWHPSR 248
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +2
Query: 71 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 250
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 251 EAVTIIETPP 280
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 280 bits (687), Expect = 1e-75
Identities = 127/200 (63%), Positives = 149/200 (74%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 399 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 578
Y W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 579 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGXGYKXCHFSXGTQRSYP 758
IQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVTKG G+K T++ P
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LP 228
Query: 759 XKTHKGLRKVACIGAWHPSR 818
KTHKGLRKVACIGAWHPSR
Sbjct: 229 RKTHKGLRKVACIGAWHPSR 248
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +2
Query: 71 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 250
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 251 EAVTIIETPP 280
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 280 bits (687), Expect = 1e-75
Identities = 127/200 (63%), Positives = 149/200 (74%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 399 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 578
Y W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 579 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGXGYKXCHFSXGTQRSYP 758
IQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVTKG G+K T++ P
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK-LP 241
Query: 759 XKTHKGLRKVACIGAWHPSR 818
KTHKGLRKVACIGAWHPSR
Sbjct: 242 RKTHKGLRKVACIGAWHPSR 261
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +2
Query: 32 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPP 280
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 167 bits (406), Expect = 2e-41
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +2
Query: 32 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPP 280
DRPGSKINKKE+VEAVT++ETPP
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPP 83
Score = 79.4 bits (187), Expect = 6e-15
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 122
Query: 399 Y 401
Y
Sbjct: 123 Y 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 138 bits (335), Expect = 7e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +2
Query: 71 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 250
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 251 EAVTIIETPP 280
EAVT++ETPP
Sbjct: 61 EAVTVLETPP 70
Score = 72.1 bits (169), Expect = 9e-13
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +3
Query: 219 PVQKSTRKXXXXXXXXXXXXXMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 395
P K +K M+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
isoform B protein.
Length = 4705
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 313 SMYPTTPTQTXRRSLDDGDSLH-DLFLVDF*TGT-VRFSNHVGHTGLITDKSSQMNRFAR 140
+++PTT T + L ++ H +L +V + G+ V NH ++ Q+N +A
Sbjct: 227 AIHPTTGEITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAP 286
Query: 139 VVFRERLDLTTMTTGPL-FGI 80
+F + T T+ PL +GI
Sbjct: 287 EIFTKTFSSVTPTSNPLIYGI 307
>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
isoform A protein.
Length = 4705
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 313 SMYPTTPTQTXRRSLDDGDSLH-DLFLVDF*TGT-VRFSNHVGHTGLITDKSSQMNRFAR 140
+++PTT T + L ++ H +L +V + G+ V NH ++ Q+N +A
Sbjct: 227 AIHPTTGEITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAP 286
Query: 139 VVFRERLDLTTMTTGPL-FGI 80
+F + T T+ PL +GI
Sbjct: 287 EIFTKTFSSVTPTSNPLIYGI 307
>BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p protein.
Length = 1430
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +3
Query: 453 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 632
L + E + +K + + A T+ +L K + + + M+ +L +E VKW REH
Sbjct: 980 LQEDNYELEMEKSKLQTRLQEIQAETESELAKALEARNYEMQ-KLQNQIVELTVKWEREH 1038
Query: 633 LEKPIPVDSVFAQDEMIDCIG 695
+ + + A ++ + +G
Sbjct: 1039 GDLQTSLAKIEALEDCLKAVG 1059
>AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-PA,
isoform A protein.
Length = 1430
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +3
Query: 453 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 632
L + E + +K + + A T+ +L K + + + M+ +L +E VKW REH
Sbjct: 980 LQEDNYELEMEKSKLQTRLQEIQAETESELAKALEARNYEMQ-KLQNQIVELTVKWEREH 1038
Query: 633 LEKPIPVDSVFAQDEMIDCIG 695
+ + + A ++ + +G
Sbjct: 1039 GDLQTSLAKIEALEDCLKAVG 1059
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,620,038
Number of Sequences: 53049
Number of extensions: 821192
Number of successful extensions: 1738
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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