Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_E23
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.023
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.030
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.040
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.040
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.053
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.053
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.070
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.070
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.65
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.65
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.65
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.86
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.86
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 1.1
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 1.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 2.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 24 2.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 4.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.0
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.5 bits (73), Expect = 0.002
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMDFVIDXRIYXM 603
WP D C FGS +H+ +E++ +D + + M
Sbjct: 176 WPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVIDXR-----IYXMFXSGXWDV 627
T +P D QTC KFGS N D++ + + + SG WD+
Sbjct: 156 TYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 458
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
K+ VN L ++ N+ E ++ L+ W D +L W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWD 91
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 26.2 bits (55), Expect = 0.37
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D QTC KFGS ++ ++D
Sbjct: 160 FPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D QTC KFGS ++ ++D
Sbjct: 156 FPFDEQTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVIDXR----IYXMFXSGXWDV 627
T +P D Q C KFGS ++ ++D + I +G WD+
Sbjct: 153 TWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.023
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 469 TLALQFLCS*TIWPNDMQTCTFKFGSXMHNSDEMDFVID 585
TL L + I+P+D Q C + S H +DEM F D
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 27.9 bits (59), Expect = 0.12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVI 582
T +P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.65
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +2
Query: 143 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 27.9 bits (59), Expect = 0.12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVI 582
T +P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.65
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +2
Query: 143 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 119
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.030
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D Q+C KFGS +N ++D
Sbjct: 165 FPFDEQSCIMKFGSWTYNGAQVD 187
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.040
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 27.9 bits (59), Expect = 0.12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVI 582
T +P D Q C KFGS ++ +++D V+
Sbjct: 116 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.040
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDN 503
ER+WRPD N + + R+S +G + + RL I M+L N
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRN 168
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.053
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.053
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 455
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D QTC KFGS ++ ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.070
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 25.4 bits (53), Expect = 0.65
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMD 573
+P D+QTC K GS ++ ++D
Sbjct: 160 FPYDVQTCVLKLGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.070
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 458
V R+WRPD +L N A + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEMDFVI 582
T +P D Q C KFGS ++ +++D V+
Sbjct: 116 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMDFVI 582
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMDFVI 582
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMDFVI 582
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHNSDEMDFVI 582
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +2
Query: 158 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 176 PPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
P + ++ L ++H N+ E TV L++ W L+W +
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 499 TIWPNDMQTCTFKFGSXMHNSDEM 570
T WP D+ CT S H S+E+
Sbjct: 164 TWWPYDILNCTIHIASWSHGSNEI 187
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ +IE IP P
Sbjct: 102 NYNNNNYNKKLYYNIINIEQIPVP 125
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ +IE IP P
Sbjct: 102 NYNNNNYNKKLYYNIINIEQIPVP 125
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 107 AALAIAQVRRNGNKNNISRRTFYDN*SIEAIPSP 6
++L+ + N N N +++ +Y+ +IE IP P
Sbjct: 316 SSLSNKTIHNNNNYKNYNKKLYYNIINIEQIPVP 349
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.0 bits (52), Expect = 0.86
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 95 IAQVRRNGNKNNISRRTFYDN*SIEAIPSP 6
I+ + N NN +++ +Y+ IE IP P
Sbjct: 90 ISNISNYNNNNNYNKKLYYNINYIEQIPVP 119
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.0 bits (52), Expect = 0.86
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 95 IAQVRRNGNKNNISRRTFYDN*SIEAIPSP 6
I+ + N NN +++ +Y+ IE IP P
Sbjct: 328 ISNISNYNNNNNYNKKLYYNINYIEQIPVP 357
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ IE IP P
Sbjct: 98 NNNYNNYNKKLYYNINYIEQIPVP 121
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 460 SAWTLALQFLCS*TIWPNDMQTCTFKFGSXMHNSDEMDFV 579
S TL L +P+D Q C+ S H + ++ F+
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ IE IP P
Sbjct: 98 NYNNNNYNKKLYYNINYIEQIPIP 121
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ IE IP P
Sbjct: 98 NYNNNNYNKKLYYNINYIEQIPIP 121
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ IE IP P
Sbjct: 98 NYNNNNYNKKLYYNINYIEQIPIP 121
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN +++ +Y+ IE IP P
Sbjct: 98 NYNNNNYNKKLYYNINYIEQIPIP 121
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ +IE IP P
Sbjct: 344 NNNYNNNCKKLYYNIINIEQIPVP 367
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 197 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN 310
+V + L +R A I + + +Q + W+D+RL +N
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFN 98
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAG 316
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 80 RNGNKNNISRRTFYDN*SIEAIPSP 6
+N N N S++ +Y+ +IE IP P
Sbjct: 312 KNYNNNYNSKKLYYNIINIEQIPVP 336
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 80 RNGNKNNISRRTFYDN*SIEAIPSP 6
+N N N S++ +Y+ +IE IP P
Sbjct: 323 KNYNNNYNSKKLYYNIINIEQIPVP 347
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ IE IP P
Sbjct: 102 NNNYNNNCKKLYYNINYIEQIPVP 125
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ IE IP P
Sbjct: 102 NNNYNNNCKKLYYNINYIEQIPIP 125
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ IE IP P
Sbjct: 102 NNNYNNNCKKLYYNINYIEQIPIP 125
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ IE IP P
Sbjct: 102 NNNYNNNCKKLYYNINYIEQIPIP 125
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN ++ +Y+ IE IP P
Sbjct: 341 NNNYNNNYKKLYYNINYIEQIPVP 364
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN + +Y+ IE IP P
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN + +Y+ IE IP P
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN + +Y+ IE IP P
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 77 NGNKNNISRRTFYDN*SIEAIPSP 6
N N NN + +Y+ IE IP P
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIP 124
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 71 NKNNISRRTFYDN*SIEAIPSP 6
+ NN +++ +Y+ +IE IP P
Sbjct: 324 HNNNYNKKLYYNIINIEQIPVP 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,226
Number of Sequences: 438
Number of extensions: 4056
Number of successful extensions: 91
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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