Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_E18
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 36 3e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 6e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 35 0.001
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 34 0.001
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.002
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 33 0.004
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.004
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.006
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.006
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.007
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.007
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 31 0.010
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 31 0.017
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.040
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 26 0.49
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 0.85
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 0.85
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 4.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.5 bits (88), Expect = 4e-05
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 353 RLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDXXTPISMQLDNWXNXMQ 520
++W+PD+VL N A G+Y +R + + NG V W+ + ++ + + Q
Sbjct: 107 KVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQ 163
Query: 521 TCTFXXGSRMXNSDEMDLVI 580
TC GS N D++ L +
Sbjct: 164 TCIMKFGSWTFNGDQVSLAL 183
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 183 TSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
T K+ VN L ++ N+ E ++ L+ W D +L W+
Sbjct: 49 TEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWD 91
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 37.1 bits (82), Expect = 2e-04
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +2
Query: 320 GAADTWLVSSXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQL 496
G + V S +WRPD+VL NA A +A ++ G V W + + +
Sbjct: 94 GGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDV 153
Query: 497 DNWXNXMQTCTFXXGSRMXNSDEMDL 574
+ + QTC GS + ++DL
Sbjct: 154 EYFPFDEQTCVMKFGSWTYDGFQVDL 179
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.3 bits (80), Expect = 3e-04
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDXXTPISMQLDNWX 508
V S +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 509 NXMQTCTFXXGSRMXNSDEMDL 574
+QTC GS + ++DL
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVDL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.3 bits (80), Expect = 3e-04
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
V S +WRPD+VL NA A +A + + G V W + + ++ +
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 518 QTCTFXXGSRMXNSDEMDL 574
QTC GS + ++DL
Sbjct: 165 QTCVLKFGSWTYDGFKVDL 183
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.5 bits (78), Expect = 6e-04
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +2
Query: 320 GAADTWLVSSXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDXXTPIS 487
G + V S +W PD+VL N A G+Y + +A + G VSW +
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCE 159
Query: 488 MQLDNWXNXMQTCTFXXGSRMXNSDEMDL 574
+ ++ + Q+C GS N ++DL
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVDL 188
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXN 511
V S +W PD+ + N+ T G V ++GSVS + + + +W
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 512 XMQTCTFXXGSRMXNSDEMDLVIDXRIYXM 601
C GS + + +E+++ +D + + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.65
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +3
Query: 141 STRSSQRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.4 bits (53), Expect = 0.65
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +3
Query: 141 STRSSQRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 32.7 bits (71), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +2
Query: 320 GAADTWLVSSXRLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDXXTPIS 487
G DT V S +W PD+VL N A G+Y + +A + + G V W +
Sbjct: 90 GGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCE 146
Query: 488 MQLDNWXNXMQTCTFXXGSRMXNSDEMDL 574
+ ++ + QTC GS + +DL
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVDL 175
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 32.7 bits (71), Expect = 0.004
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 353 RLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXMQTCT 529
RLW+PDV++ N+A G Y V NNG+ ++ + + + + Q C
Sbjct: 104 RLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCE 163
Query: 530 FXXGSRMXNSDEMDL 574
GS + ++DL
Sbjct: 164 MKFGSWTYDGFQLDL 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 353 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDXXTPISMQLDNWXNXMQT 523
R+WRPD N + + R+S +G + + RL M+L N+ Q+
Sbjct: 116 RIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQS 175
Query: 524 CTFXXGS 544
C GS
Sbjct: 176 CPLILGS 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VSSXRLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXXTPISMQLDNWXNXM 517
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 518 QTCTFXXGSRMXNSDEMDLVI 580
Q C GS + +++DLV+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +3
Query: 156 QRTIGTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 308
+R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWN 51
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 31.5 bits (68), Expect = 0.010
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +2
Query: 320 GAADTWLVSSXRLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDXXTPISMQL 496
G V S +W PD+VL N A G + +A + G V W + + +
Sbjct: 90 GGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDV 149
Query: 497 DNWXNXMQTCTFXXGSRMXNSDEMDL 574
+ QTC GS + ++DL
Sbjct: 150 RYFPFDQQTCFMKFGSWTYDGIQIDL 175
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 30.7 bits (66), Expect = 0.017
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 8/151 (5%)
Frame = +2
Query: 116 NATSLSLMIDSLLATYDRDSPPDLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQT 295
N +++S ++D+LL YD PD + S + + S + RQ+
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGG-PPATVEVDIMVRSMGPISEVDMTYSMDCYFRQS 60
Query: 296 TELERRVS--GAADTWLVSSX---RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVS 451
++RR++ G +T +S R+W+PD N + T R+ +G V
Sbjct: 61 W-VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVL 119
Query: 452 WIKRLDXXTPISMQLDNWXNXMQTCTFXXGS 544
+ RL M L+N+ Q C GS
Sbjct: 120 YSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 168 GTPPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAG 314
G PP T ++ + + I E + T + + +W+D+RL++ G
Sbjct: 26 GGPPATVEVDIMVR---SMGPISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.040
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +2
Query: 353 RLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDXXTPISMQLDNWXNXMQTC 526
R+WRPD +L N A + VS+ G V W+ + + ++ + Q C
Sbjct: 86 RVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
Query: 527 TFXXGSRMXNSDEMDL 574
S + +++L
Sbjct: 146 VLKWASWTYDGYQLEL 161
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 174 PPPTSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 311
P + ++ L ++H N+ E TV L++ W L+W +
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.8 bits (54), Expect = 0.49
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 353 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDXXTPISMQLDNWXNXMQT 523
++W PD N + D R R+S +GSV++ R M L + Q
Sbjct: 115 KIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQN 174
Query: 524 CT 529
CT
Sbjct: 175 CT 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.0 bits (52), Expect = 0.85
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +2
Query: 338 LVSSXRLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDXXTPISMQLDNWX 508
L + R+W PD+ N + + R+ NGSV + R+ M L +
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 509 NXMQTCTFXXGSRMXNSDEM 568
Q C+ S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.0 bits (52), Expect = 0.85
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +2
Query: 338 LVSSXRLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDXXTPISMQLDNWX 508
L + R+W PD+ N + + R+ NGSV + R+ M L +
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 509 NXMQTCTFXXGSRMXNSDEM 568
Q C+ S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 195 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN 308
+V + L +R A I + + +Q + W+D+RL +N
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFN 98
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 275 NELDRQTTELERRVSGAADTWLVSSXR 355
NE+D ++ E R+ + WL+ R
Sbjct: 23 NEIDLRSRTKEERLQHRREAWLIQQER 49
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 133 GQ*CCVFAFCRTSYSTSEEKQVT 65
G+ CC F T Y + K VT
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVT 624
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,000
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 59
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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