Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_E14
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 6e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 0.001
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.002
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.006
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 32 0.007
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 32 0.007
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 32 0.007
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 31 0.013
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.017
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 31 0.017
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.022
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 30 0.022
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.039
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.039
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.052
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.052
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 29 0.052
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.052
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.069
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 26 0.48
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.85
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.85
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 38.7 bits (86), Expect = 6e-05
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 333 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDNWPNDXQ 503
ER+WRPD N + + R+S +G + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 504 TCTXQXSVLXCTIV 545
+C C V
Sbjct: 175 SCPLILGSCKCIYV 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 330 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
+E++W PD N + D R R+S +GSV+ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 501 QTCTXQXSVLXCTIV 545
Q CT + T++
Sbjct: 173 QNCTVEIESYGYTVL 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPN 494
V S+ +W PD+ + N+ T G V ++GSVSC+ + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 495 DXQTC 509
D C
Sbjct: 179 DTHRC 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 501 QTC 509
QTC
Sbjct: 165 QTC 167
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 501 QTC 509
QTC
Sbjct: 161 QTC 163
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 33.5 bits (73), Expect = 0.002
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 501 QTC 509
Q C
Sbjct: 160 QRC 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.003
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 336 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDXQT 506
R+W+PD N + T R+ +G V RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 507 CTXQ 518
C Q
Sbjct: 144 CPLQ 147
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 215 IRESESTVRILADLQMNWIDKRLSWNAG 298
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.004
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISMQLDNWP 491
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 492 NDXQTC 509
D QTC
Sbjct: 162 YDVQTC 167
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 306 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 458
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 459 TPISMQLDNWPNDXQTC 509
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 306 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 458
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 459 TPISMQLDNWPNDXQTC 509
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 306 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 458
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 459 TPISMQLDNWPNDXQTC 509
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 333 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 501 QTC 509
QTC
Sbjct: 163 QTC 165
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 319
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.007
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 501 QTC 509
Q C
Sbjct: 191 QHC 193
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM 304
S + +R + + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 305 G 307
G
Sbjct: 124 G 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.007
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 501 QTC 509
Q C
Sbjct: 191 QHC 193
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM 304
S + +R + + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 305 G 307
G
Sbjct: 124 G 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 31.1 bits (67), Expect = 0.013
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 300 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSCIKRLDISTPISM 473
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 474 QLDNWPNDXQTC 509
+ +P D QTC
Sbjct: 148 DVRYFPFDQQTC 159
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.017
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.017
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 306 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISM 473
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 474 QLDNWPNDXQTC 509
++ +P D Q+C
Sbjct: 161 NVEYFPFDEQSC 172
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.022
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 30.3 bits (65), Expect = 0.022
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 306 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISM 473
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 474 QLDNWPNDXQTC 509
++ +P D QTC
Sbjct: 148 DVEYFPFDEQTC 159
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDISTPISMQLDNWPND 497
V R+WRPD +L N A + VS+ G V + + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 498 XQTC 509
Q C
Sbjct: 142 EQRC 145
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.052
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.052
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDX 500
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 501 QTC 509
Q C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.052
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 321 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDNWP 491
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 492 NDXQTCT 512
D Q C+
Sbjct: 169 LDRQVCS 175
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.052
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 321 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDNWP 491
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 492 NDXQTCT 512
D Q C+
Sbjct: 169 LDRQVCS 175
Score = 23.8 bits (49), Expect = 2.0
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 179 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 319
+V + L +R A I + + + + W+D+RL +N G L++L
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.7 bits (61), Expect = 0.069
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 339 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDISTPISMQLDNWPNDXQTC 509
+WRPD NA T + ++ + ++ ++ + +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 510 TXQXSVLXCT 539
+ L T
Sbjct: 147 SMMIESLSHT 156
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.8 bits (54), Expect = 0.48
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 182 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 295
++ L ++H N+ E TV L++ W L+W +
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.85
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +3
Query: 333 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDISTPISMQLDNWPND 497
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 498 XQTC 509
Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.85
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 333 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDISTPISMQLDNWPNDXQ 503
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 504 TCTXQXSVLXCT 539
C Q L T
Sbjct: 176 ECKLQMESLSHT 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,009
Number of Sequences: 438
Number of extensions: 4524
Number of successful extensions: 49
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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