Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_E08
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 2e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 5e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 5e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 34 0.002
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 34 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.019
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.025
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 30 0.025
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 30 0.025
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 30 0.025
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.043
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.043
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.057
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.057
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.057
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.40
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.40
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 26 0.40
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 8.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 PRERLWRPDVVLL-NAAATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
P + +WRPD+VL NA A +A + + G V W + + ++ +P D Q
Sbjct: 106 PSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQ 165
Query: 488 TCTXK 502
TC K
Sbjct: 166 TCVLK 170
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWG 291
W E+G
Sbjct: 92 WEPKEYG 98
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
ER+WRPD N + + R+S G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 488 TC 493
+C
Sbjct: 175 SC 176
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 311 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDISTPISMQLDNWPN 478
P + +WRPD+VL N A G+Y + +A V G V W + S+ ++ +P
Sbjct: 106 PSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPY 162
Query: 479 DMQTCTXK 502
D+QTC K
Sbjct: 163 DVQTCVLK 170
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWG 291
W E+G
Sbjct: 92 WEPKEYG 98
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 PRERLWRPDVVLL-NAAATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
P + +WRPD+VL NA A +A ++ G V W + + ++ +P D Q
Sbjct: 102 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQ 161
Query: 488 TCTXK 502
TC K
Sbjct: 162 TCVMK 166
Score = 26.2 bits (55), Expect = 0.40
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +1
Query: 79 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 237
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 238 LQMNWIDKRLSWNAGEWG 291
++ +W D +L W+ E+G
Sbjct: 77 VEQSWYDYKLKWDPKEYG 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.9 bits (84), Expect = 1e-04
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 311 PRERLWRPDVVLLNAAATTAGDYALRAR----VSNXGSVSWIKRLDISTPISMQLDNWPN 478
P +++W+PD+VL N A G+Y +R + + G V W+ + ++ + +P
Sbjct: 104 PPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPF 160
Query: 479 DMQTCTXK 502
D QTC K
Sbjct: 161 DQQTCIMK 168
Score = 25.0 bits (52), Expect = 0.93
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 311 PRERLWRPDVVLLNAAATTAGDYALRAR--VSNXGSVSWIKRLDISTPISMQLDNWPNDM 484
P R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDE 142
Query: 485 QTCTXK 502
Q C K
Sbjct: 143 QRCVLK 148
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 288
+V L+LH ++ E + + W D L WNA E+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEF 74
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 37.1 bits (82), Expect = 2e-04
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +2
Query: 287 GAAALGWCPRERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDISTPIS 454
G + + P E +W PD+VL N A G+Y + +A + G VSW +
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCE 159
Query: 455 MQLDNWPNDMQTCTXK 502
+ ++ +P D Q+C K
Sbjct: 160 INVEYFPFDEQSCIMK 175
Score = 27.1 bits (57), Expect = 0.23
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 271 WNAGEWG 291
WN E+G
Sbjct: 97 WNPEEYG 103
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 243
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNAGEW 288
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 305 WCPRERLWRPDVVLLNAAATTAGDYAL-RARVSNXGSVSWIKRLDISTPISMQLDNWPND 481
+ P E +W PD+VL N A G + +A + G V W + + + +P D
Sbjct: 96 YVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFD 155
Query: 482 MQTCTXK 502
QTC K
Sbjct: 156 QQTCFMK 162
Score = 32.7 bits (71), Expect = 0.005
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 219
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 220 VRILADLQMNWIDKRLSWNAGEWGCSTWL 306
+ L+ W D + W+ E+G T L
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTEL 95
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.3 bits (75), Expect = 0.002
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
P RLW+PDV++ N+A G Y V N G+ ++ + + + +P D Q
Sbjct: 101 PPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQ 160
Query: 488 TCTXK 502
C K
Sbjct: 161 RCEMK 165
Score = 24.2 bits (50), Expect = 1.6
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 222
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RILADLQMNWIDKRLSWNAGEWG 291
L++ W D + WN ++G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
E++W PD N + D R R+S GSV++ R + M L +P D Q
Sbjct: 114 EKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQ 173
Query: 488 TCT 496
CT
Sbjct: 174 NCT 176
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.003
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +2
Query: 281 GNGAAALGWCPRERLWRPDVVLLNAAAT---TAGDYALRARVSNXGSVSWIKRLDISTPI 451
G AL R+W+PD N + T R+ G V + RL I
Sbjct: 71 GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGC 130
Query: 452 SMQLDNWPNDMQTC 493
M L+N+P D Q C
Sbjct: 131 PMNLENFPMDTQRC 144
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAGE 285
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 33.1 bits (72), Expect = 0.004
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 311 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDISTPISMQLDNWPN 478
P E +W PD+VL N A G+Y + +A + + G V W + + ++ +P
Sbjct: 98 PSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPF 154
Query: 479 DMQTCTXK 502
D QTC K
Sbjct: 155 DEQTCFMK 162
Score = 28.7 bits (61), Expect = 0.075
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 210
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 211 ESTVRILADLQMNWIDKRLSWNAGEWG 291
T + ++ W D +L WN ++G
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYG 90
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.019
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.025
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.025
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 317 ERLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPN 478
+ +W PD +N ATT+ ++ R+ + GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 479 DMQTC 493
D Q C
Sbjct: 148 DRQLC 152
Score = 23.4 bits (48), Expect = 2.8
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 253 IDKRLSW 273
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.025
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 317 ERLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPN 478
+ +W PD +N ATT+ ++ R+ + GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 479 DMQTC 493
D Q C
Sbjct: 148 DRQLC 152
Score = 22.2 bits (45), Expect = 6.5
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 253 IDKRLSW 273
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 30.3 bits (65), Expect = 0.025
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 317 ERLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPN 478
+ +W PD +N ATT+ ++ R+ + GS++ RL I+ M L +P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 479 DMQTC 493
D Q C
Sbjct: 87 DRQLC 91
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 497 XK 502
K
Sbjct: 195 MK 196
Score = 28.7 bits (61), Expect = 0.075
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEWG 291
WN E+G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 497 XK 502
K
Sbjct: 195 MK 196
Score = 28.7 bits (61), Expect = 0.075
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEWG 291
WN E+G
Sbjct: 118 WNESEYG 124
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.043
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.043
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 RLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
+LW+PD+++ N+A G Y V++ GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCD 126
Query: 497 XK 502
K
Sbjct: 127 MK 128
Score = 28.3 bits (60), Expect = 0.100
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 323 LWRPDVVLLNAAATTAGDYALRAR---VSNXGSVSWIKRLDISTPISMQLDNWPNDMQTC 493
+WRPD NA T + ++ + + ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 494 T 496
+
Sbjct: 147 S 147
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.40
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQT 490
R+W PD+ N + + R+ GSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 491 CTXK 502
C+ +
Sbjct: 174 CSLR 177
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.40
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 320 RLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQT 490
R+W PD+ N + + R+ GSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 491 CTXK 502
C+ +
Sbjct: 174 CSLR 177
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 26.2 bits (55), Expect = 0.40
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +2
Query: 323 LWRPDVVLLNAAATT---AGDYALRARVSNXGSVSWIKRLDISTPISMQLDNWPNDMQTC 493
+W PD+ + N+ T G V + GSVS + + + +WP D C
Sbjct: 124 IWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRARVSN-----XGSVSWIKRLDISTPISMQLDNWPND 481
+ LW+PD LNA + AL + S+ +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 482 MQTC 493
+Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR---VSNXGSVSWIKRLDISTPISMQLDNWPNDMQ 487
+ +WRPD NA + T + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 488 TC 493
C
Sbjct: 176 EC 177
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 303 PSAAAPFPCVPTQS 262
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,900
Number of Sequences: 438
Number of extensions: 4344
Number of successful extensions: 73
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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