Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_E05
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens ...    36   0.18 
AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein pr...    34   0.71 
AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens ...    32   2.9  
AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens ...    32   2.9  
BC130390-1|AAI30391.1|  755|Homo sapiens FAM22F protein protein.       31   3.8  
AL691447-4|CAI13277.1|  655|Homo sapiens family with sequence si...    31   3.8  
AL158827-6|CAH72568.1|  622|Homo sapiens family with sequence si...    31   3.8  
AL133071-1|CAB61394.1|  613|Homo sapiens hypothetical protein pr...    31   3.8  
AF174114-1|AAD53860.1|  133|Homo sapiens immunoglobulin heavy ch...    31   5.0  

>AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46366 fis, clone TESTI4051388. ).
          Length = 286

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 43/141 (30%), Positives = 53/141 (37%), Gaps = 8/141 (5%)
 Frame = +2

Query: 83  PVTSQPES--RKAPP--SPRYYSVCISTIYPGLRRPIWRSSPMTPPSTT--RVGRRRCFI 244
           P  + P +  R+ PP  SPR      S   P  R P  R  P  PP+ T       R   
Sbjct: 45  PTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPP 104

Query: 245 DDFRPRLPPWDXXXXXXXXXXXPRKAQRCSSKGVALRTPR*ASPSRLGASITP--PPPFA 418
            +   R PP              R   R S +    RTP  ASP+R     +P   PP A
Sbjct: 105 TESPARTPPTASPARTPPRASPTRTPPRASPR----RTPSTASPTRTPPRASPRRTPPRA 160

Query: 419 QSRCSTSPYRGPRRSNI*ASP 481
            S   T P   P+R+   ASP
Sbjct: 161 -SPTRTPPRASPKRTPPRASP 180


>AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein
           protein.
          Length = 580

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 43/145 (29%), Positives = 56/145 (38%), Gaps = 5/145 (3%)
 Frame = +2

Query: 89  TSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPM-TPPSTTRVGRRRCFIDDFRPRL 265
           T  P    A  SP   S+  +     L R   R+SP  TPP  +     R       PR 
Sbjct: 159 TGTPPRAWATRSPSTASLTRTPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPRA 218

Query: 266 PPWDXXXXXXXXXXXPRKAQRCSSKGVALRTPR*ASPSRL--GASITPPPPFAQSRC--S 433
            P             PR++ R S +    R P  ASP+R    AS T  PP A       
Sbjct: 219 SPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASPTGSPPRASPMTPPR 278

Query: 434 TSPYRGPRRSNI*ASPSXSRMTFRP 508
            SP R P R++   +PS + +T  P
Sbjct: 279 ASP-RTPPRASPTTTPSRASLTRTP 302


>AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46261 fis, clone TESTI4025062. ).
          Length = 280

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 578 SKMSLRNKVT-LYKTCIRPGHDLCKCSVRSRGPHTLKILSN 697
           S M L ++ + ++ +C+  GH L  CSVR  GP T   LSN
Sbjct: 147 SSMCLPSRTSSIFYSCLPLGHHLPFCSVRPLGPPTTSPLSN 187


>AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43836 fis, clone TESTI4005857. ).
          Length = 280

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 578 SKMSLRNKVT-LYKTCIRPGHDLCKCSVRSRGPHTLKILSN 697
           S M L ++ + ++ +C+  GH L  CSVR  GP T   LSN
Sbjct: 147 SSMCLPSRTSSIFYSCLPLGHHLPFCSVRPLGPPTTSPLSN 187


>BC130390-1|AAI30391.1|  755|Homo sapiens FAM22F protein protein.
          Length = 755

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 456
           R WR+  +P  S+ +L   GR P   L  P   +R  +P+P     +   +F  P P A 
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708

Query: 457 KVKYLG 474
           K  + G
Sbjct: 709 KTPHPG 714


>AL691447-4|CAI13277.1|  655|Homo sapiens family with sequence
           similarity 22, member F protein.
          Length = 655

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 411
           R WR+  +P  S+ +L   GR P   L  P   +R  +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590


>AL158827-6|CAH72568.1|  622|Homo sapiens family with sequence
           similarity 22, member G protein.
          Length = 622

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 411
           R WR+  +P  S+ +L   GR P   L  P   +R  +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557


>AL133071-1|CAB61394.1|  613|Homo sapiens hypothetical protein
           protein.
          Length = 613

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 456
           R WR+  +P  S+ +L   GR P   L  P   +R  +P+P     +   +F  P P A 
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566

Query: 457 KVKYLG 474
           K  + G
Sbjct: 567 KTPHPG 572


>AF174114-1|AAD53860.1|  133|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 133

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 187 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 294
           L +DDTA+YY  R + + H    +  T   G WF  W
Sbjct: 86  LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,035,389
Number of Sequences: 237096
Number of extensions: 3081612
Number of successful extensions: 21275
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21245
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)