Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_D24
         (831 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0027 + 9667508-9668800                                           33   0.37 
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420...    33   0.37 
04_03_0075 + 10726807-10727721,10728756-10729496                       31   1.1  
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421...    29   3.4  
11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15...    29   4.5  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    29   4.5  
03_05_0431 + 24221881-24224586                                         29   6.0  

>04_03_0027 + 9667508-9668800
          Length = 430

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 1   YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKGI 96
           Y    KD   ++ RW L L+EFD EI  +KGI
Sbjct: 64  YLLTKKDAKPRLIRWILILQEFDIEINNKKGI 95


>04_01_0312 +
           4206400-4206627,4206661-4207269,4207425-4207902,
           4208006-4208297,4209278-4209569,4210013-4210465
          Length = 783

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 1   YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKGI 96
           Y    KD   ++ RW L L+EFD EI  +KG+
Sbjct: 555 YLLTKKDAKPRLLRWILLLQEFDLEIKDKKGV 586


>04_03_0075 + 10726807-10727721,10728756-10729496
          Length = 551

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 1   YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKGI 96
           Y    KD   ++ +W L L+EFD EI  +KG+
Sbjct: 306 YLLTKKDAKPRLLQWILLLQEFDLEIKDKKGV 337


>07_01_0567 -
           4214196-4214351,4214539-4214845,4215005-4215069,
           4215406-4215471,4215594-4215639,4215671-4216200
          Length = 389

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 721 DSFSKYLQSASLRHFEKAARHENPL 795
           D+F +Y+ + SLR+F     HE P+
Sbjct: 167 DTFDRYVSAGSLRYFLNCVSHEQPM 191


>11_01_0022 +
           151233-151515,152632-152852,153579-153656,154558-154674,
           155970-156316,156504-157032
          Length = 524

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 639 NLKGFQVGAGCVSEHYACIR 580
           N   +QVG GC+S+ Y C+R
Sbjct: 348 NATNYQVGTGCLSDIYFCLR 367


>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +3

Query: 162 YSCRKMSLLHRRLQIA----VATMGQWFRKWRIDINPTKSAAVLFKRGR 296
           +S     L+HR L  A    VA   +  R WR  + P + AA L  RGR
Sbjct: 89  FSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGR 137


>03_05_0431 + 24221881-24224586
          Length = 901

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 476 ARSRTVFIWG-RNVIPLSRVTPRYLTFETHGMG 381
           AR+RTVF WG  +V  +  + PR + F++ G G
Sbjct: 175 ARNRTVFCWGDESVSGVIGLAPRNVRFQSIGAG 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,882,966
Number of Sequences: 37544
Number of extensions: 536201
Number of successful extensions: 1356
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)