Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_D24
(831 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 115 9e-26
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 107 1e-23
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 107 1e-23
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 100 3e-21
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 100 3e-21
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 96 6e-20
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 96 6e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 93 4e-19
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 91 2e-18
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 79 6e-15
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 79 6e-15
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 79 6e-15
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 79 7e-15
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 3e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 58 2e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 2e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 54 3e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 54 3e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 1e-05
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 47 4e-05
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 44 3e-04
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 44 3e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 8e-04
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 42 8e-04
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 41 0.002
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 40 0.003
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 40 0.003
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 39 0.010
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 39 0.010
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 38 0.022
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 38 0.022
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 38 0.022
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 36 0.051
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 36 0.068
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 36 0.090
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 36 0.090
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 34 0.27
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 33 0.36
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 32 0.84
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.5
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 30 4.5
DQ503470-1|ABF54966.1| 353|Drosophila melanogaster OLF186-F pro... 30 4.5
AY071273-1|AAL48895.1| 351|Drosophila melanogaster RE30427p pro... 30 4.5
AF188634-1|AAF01457.1| 351|Drosophila melanogaster F protein pr... 30 4.5
AE013599-2579|AAM68473.1| 351|Drosophila melanogaster CG11430-P... 30 4.5
AE013599-2578|AAF57780.2| 351|Drosophila melanogaster CG11430-P... 30 4.5
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 5.9
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 5.9
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 5.9
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 5.9
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 29 7.8
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 29 7.8
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 115 bits (276), Expect = 9e-26
Identities = 55/145 (37%), Positives = 83/145 (57%)
Frame = +1
Query: 361 PITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRN 540
P+ + P+P + KYLGV LDR +TF H+ +R R + + Y +L SRSKLSL N
Sbjct: 731 PVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSN 790
Query: 541 KVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLEL 720
K+T+YK + P Y ++ A +H+K +Q IQ++ R+ G WF+RN LH DL+L
Sbjct: 791 KLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKL 850
Query: 721 DSFSKYLQSASLRHFEKAARHENPL 795
+ + S R+ ++ RH N L
Sbjct: 851 ATVFDEINKHSSRYHDRLERHRNRL 875
Score = 36.3 bits (80), Expect = 0.051
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 102 DIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVL 281
D+ ++ LA FADD + Y R +Q +W R+W I IN +KS V
Sbjct: 662 DVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVC 721
Query: 282 F 284
F
Sbjct: 722 F 722
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 107 bits (258), Expect = 1e-23
Identities = 54/151 (35%), Positives = 84/151 (55%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRS 522
N P+ L IP +V YLGV LDR +T+R HI+ L+ ++ +RS
Sbjct: 716 NKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARS 775
Query: 523 KLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDL 702
LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GAPW+LRN ++
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENI 835
Query: 703 HDDLELDSFSKYLQSASLRHFEKAARHENPL 795
H DL++ + + ++ EK H NPL
Sbjct: 836 HRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 102 DIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVL 281
D P + FADDTAI + L + ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 282 F 284
F
Sbjct: 713 F 713
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 107 bits (258), Expect = 1e-23
Identities = 54/151 (35%), Positives = 84/151 (55%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRS 522
N P+ L IP +V YLGV LDR +T+R HI+ L+ ++ +RS
Sbjct: 716 NKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARS 775
Query: 523 KLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDL 702
LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GAPW+LRN ++
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENI 835
Query: 703 HDDLELDSFSKYLQSASLRHFEKAARHENPL 795
H DL++ + + ++ EK H NPL
Sbjct: 836 HRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 102 DIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVL 281
D P + FADDTAI + L + ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 282 F 284
F
Sbjct: 713 F 713
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 100 bits (239), Expect = 3e-21
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 340 ANTSAVSP-ITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCS 516
AN + P ++L G+ I KYLG+TLDR +TF HI ++ + R+ ++
Sbjct: 728 ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAP 787
Query: 517 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNV 696
R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R GAPW++R
Sbjct: 788 RNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTR 847
Query: 697 DLHDDLELDSFSKYLQSASLRHFEKAARHENPL 795
D+ DL++ LQ+ + ++ E+ H N L
Sbjct: 848 DIERDLKVPKLGDKLQNIAQKYMERLNVHPNSL 880
Score = 34.7 bits (76), Expect = 0.16
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
+A +ADDTA+ + + LQ + QW W + IN K A V F
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 100 bits (239), Expect = 3e-21
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 340 ANTSAVSP-ITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCS 516
AN + P ++L G+ I KYLG+TLDR +TF HI ++ + R+ ++
Sbjct: 530 ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAP 589
Query: 517 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNV 696
R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R GAPW++R
Sbjct: 590 RNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTR 649
Query: 697 DLHDDLELDSFSKYLQSASLRHFEKAARHENPL 795
D+ DL++ LQ+ + ++ E+ H N L
Sbjct: 650 DIERDLKVPKLGDKLQNIAQKYLERLNVHPNSL 682
Score = 34.7 bits (76), Expect = 0.16
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
+A +ADDTA+ + + LQ + QW W + IN K A V F
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 95.9 bits (228), Expect = 6e-20
Identities = 38/114 (33%), Positives = 68/114 (59%)
Frame = +1
Query: 364 ITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNK 543
+ + PI WV ++YLG+ D+ +TF+ HI + I+ LYP++ +SKLS+ NK
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 816
Query: 544 VTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLH 705
+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P++ LH
Sbjct: 817 IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 870
Score = 52.8 bits (121), Expect = 6e-07
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +3
Query: 99 NDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAV 278
+DIP++ L+LFADD A+Y + S +++ +Q + + +++KW+I INP K+ A+
Sbjct: 682 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 741
Query: 279 LFKRGR 296
F + R
Sbjct: 742 FFTKRR 747
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 95.9 bits (228), Expect = 6e-20
Identities = 38/114 (33%), Positives = 68/114 (59%)
Frame = +1
Query: 364 ITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNK 543
+ + PI WV ++YLG+ D+ +TF+ HI + I+ LYP++ +SKLS+ NK
Sbjct: 705 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 764
Query: 544 VTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLH 705
+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P++ LH
Sbjct: 765 IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 818
Score = 52.8 bits (121), Expect = 6e-07
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +3
Query: 99 NDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAV 278
+DIP++ L+LFADD A+Y + S +++ +Q + + +++KW+I INP K+ A+
Sbjct: 630 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 689
Query: 279 LFKRGR 296
F + R
Sbjct: 690 FFTKRR 695
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 93.1 bits (221), Expect = 4e-19
Identities = 47/158 (29%), Positives = 85/158 (53%)
Frame = +1
Query: 322 PLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLY 501
P + + + +PI L G + S+ KYLG+TLD+ +TF PH+K R + +L
Sbjct: 724 PCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLR 783
Query: 502 PMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPW 681
+L +S ++LR K +Y C+ P+ Y ++ AA+++ +QV+Q+R R P+
Sbjct: 784 WLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPY 843
Query: 682 FLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPL 795
++R LH DL L + + + + R+ ++ RH + L
Sbjct: 844 YVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
Score = 39.5 bits (88), Expect = 0.006
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKS 269
LA +ADD A+ YS + R LQ + T+ W ++W + +NP K+
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKT 721
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 91.1 bits (216), Expect = 2e-18
Identities = 44/128 (34%), Positives = 75/128 (58%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRS 522
N P+ L P+P +V YLGV LDR +T+R HI+ + + L+ ++ S S
Sbjct: 718 NRQDCPPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGS 777
Query: 523 KLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNVDL 702
LSL +KV LY + ++P+ TY S ++ +A+ +++ +Q QS+ R GAPW++R+ ++
Sbjct: 778 PLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENI 837
Query: 703 HDDLELDS 726
DL + S
Sbjct: 838 QRDLNIPS 845
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 102 DIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVL 281
DIP + ++ FADDTAI R +L + + + +W WRI +N K V
Sbjct: 655 DIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVT 714
Query: 282 FKRGR 296
F R
Sbjct: 715 FTLNR 719
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 79.4 bits (187), Expect = 6e-15
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Frame = +1
Query: 310 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 489
T I ++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 777 TGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 490 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIA 666
+L ++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRI 896
Query: 667 VGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI 798
+ A + R D+ + SF + AS R+ HENPLI
Sbjct: 897 INASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 79.4 bits (187), Expect = 6e-15
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Frame = +1
Query: 310 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 489
T I ++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 777 TGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 490 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIA 666
+L ++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRI 896
Query: 667 VGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI 798
+ A + R D+ + SF + AS R+ HENPLI
Sbjct: 897 INASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 79.4 bits (187), Expect = 6e-15
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Frame = +1
Query: 310 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 489
T I ++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 777 TGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 490 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIA 666
+L ++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRI 896
Query: 667 VGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI 798
+ A + R D+ + SF + AS R+ HENPLI
Sbjct: 897 INASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 79.0 bits (186), Expect = 7e-15
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Frame = +1
Query: 310 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 489
T I ++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 330 TGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 389
Query: 490 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIA 666
+L ++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R
Sbjct: 390 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRI 449
Query: 667 VGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI 798
+ A + R D+ + SF + AS R+ HENPLI
Sbjct: 450 INASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 335
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.5 bits (140), Expect = 3e-09
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Frame = +1
Query: 364 ITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNK 543
+ + GQ I SK YLGVTLD +T H+ + + + +L +L RSKL + K
Sbjct: 796 VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTK 855
Query: 544 VTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLEL 720
+ + K+ + P+ YA + ++ +QV ++R R A + RN + D +
Sbjct: 856 ILILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGV 915
Query: 721 DSFSKYLQSASLRHFEKAARHEN 789
+ ++ Q A R E H N
Sbjct: 916 KTVEEFYQQAMHRFSETIKSHPN 938
Score = 33.9 bits (74), Expect = 0.27
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
L+ +ADDT + S + R + + T W KW I +N K+ V+F
Sbjct: 732 LSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIF 783
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T PH+ V + ++ +L RSKL K+ +
Sbjct: 672 GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLIL 731
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + +N + D + +
Sbjct: 732 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVE 791
Query: 733 KYLQSASLRHFEKAARHENPLI--VXAGXYXPD 825
++ Q A R E H N + + + Y P+
Sbjct: 792 EFYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 824
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 81 LPQRHINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINP 260
+P HI + L+ +ADDT + S + R + + T W KW I +N
Sbjct: 588 MPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNA 647
Query: 261 TKSAAVLF 284
K+ V++
Sbjct: 648 AKTGHVIY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T PH+ V + ++ +L RSKL K+ +
Sbjct: 788 GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLIL 847
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + +N + D + +
Sbjct: 848 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVE 907
Query: 733 KYLQSASLRHFEKAARHENPLI--VXAGXYXPD 825
++ Q A R E H N + + + Y P+
Sbjct: 908 EFYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 81 LPQRHINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINP 260
+P HI + L+ +ADDT + S + R + + T W KW I +N
Sbjct: 704 MPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNA 763
Query: 261 TKSAAVLF 284
K+ V++
Sbjct: 764 AKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T PH+ V + ++ +L RSKL K+ +
Sbjct: 788 GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLIL 847
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + +N + D + +
Sbjct: 848 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVE 907
Query: 733 KYLQSASLRHFEKAARHENPLI--VXAGXYXPD 825
++ Q A R E H N + + + Y P+
Sbjct: 908 EFYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 81 LPQRHINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINP 260
+P HI + L+ +ADDT + S + R + + T W KW I +N
Sbjct: 704 MPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNA 763
Query: 261 TKSAAVLF 284
K+ V++
Sbjct: 764 AKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T PH+ V + ++ +L RSKL K+ +
Sbjct: 750 GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLIL 809
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + +N + D + +
Sbjct: 810 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVE 869
Query: 733 KYLQSASLRHFEKAARHENPLI--VXAGXYXPD 825
++ Q A R E H N + + + Y P+
Sbjct: 870 EFYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 902
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 81 LPQRHINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINP 260
+P HI + L+ +ADDT + S + R + + T W KW I +N
Sbjct: 666 MPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNA 725
Query: 261 TKSAAVLF 284
K+ V++
Sbjct: 726 AKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T PH+ V + ++ +L RSKL K+ +
Sbjct: 788 GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLIL 847
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + +N + D + +
Sbjct: 848 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVE 907
Query: 733 KYLQSASLRHFEKAARHENPLI--VXAGXYXPD 825
++ Q A R E H N + + + Y P+
Sbjct: 908 EFYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 81 LPQRHINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINP 260
+P HI + L+ +ADDT + S + R + + T W KW I +N
Sbjct: 704 MPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNA 763
Query: 261 TKSAAVLF 284
K+ V++
Sbjct: 764 AKTGHVIY 771
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 53.6 bits (123), Expect = 3e-07
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + N + D + +
Sbjct: 63 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVE 122
Query: 733 KYLQSASLRHFEKAARHEN 789
++ Q A R E H N
Sbjct: 123 EFYQQALHRFSETIKSHPN 141
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 53.6 bits (123), Expect = 3e-07
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 788 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 847
Query: 556 KTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFS 732
K+ + P+ YA + ++ +QV ++R R A + N + D + +
Sbjct: 848 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVE 907
Query: 733 KYLQSASLRHFEKAARHEN 789
++ Q A R E H N
Sbjct: 908 EFYQQALHRFSETIKSHPN 926
Score = 32.3 bits (70), Expect = 0.84
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 129 LALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 284
L+ +ADDT + S + R + + + W KW I +N K+ V+F
Sbjct: 720 LSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +1
Query: 376 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 555
G+ +P+V +YLG+T+ GM F HI ++R R ++G L +L + S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 556 KTCIRPVMTYASVVFAHAA 612
+ P + + + V+ A
Sbjct: 785 DGLMAPCVLFGAPVWYDTA 803
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 46.8 bits (106), Expect = 4e-05
Identities = 16/28 (57%), Positives = 25/28 (89%)
Frame = +1
Query: 10 NHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
N K P+SK+ RWRL+L+E+D+E++Y+KG
Sbjct: 584 NFKQPNSKIVRWRLQLQEYDFEVVYKKG 611
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 7 FNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
+ KDP+SK+ RWR+KL EFD++I Y KG
Sbjct: 584 YRMKDPNSKLTRWRVKLSEFDFDIKYIKG 612
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 43.6 bits (98), Expect = 3e-04
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +1
Query: 4 WFNH-KDPSSKMQRWRLKLEEFDYEIIYRKG 93
W N+ K+P+ K+QRW++KL EFDY+I Y G
Sbjct: 655 WLNNIKEPNMKLQRWKIKLNEFDYKIKYLPG 685
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 8e-04
Identities = 29/116 (25%), Positives = 54/116 (46%)
Frame = +1
Query: 328 RSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPM 507
R +R N +S I + I V+ +K LG+T D + F+ H +T+R + + +
Sbjct: 724 RKQRCN---LSDIVFNSRTIKDVNFLKILGITFDPKLLFKQHCQTLRKQLETRFNIIKFL 780
Query: 508 LCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 675
S + ++ + + + + + Y +F A++HLK LQV R A+ A
Sbjct: 781 SSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAKSHLKKLQVPYHGAVRRAIHA 836
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/28 (57%), Positives = 25/28 (89%)
Frame = +1
Query: 10 NHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
N K+P+SK+ RWRL+L E+++EII++KG
Sbjct: 697 NFKEPNSKIIRWRLQLMEYNFEIIHKKG 724
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 41.1 bits (92), Expect = 0.002
Identities = 15/31 (48%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +1
Query: 4 WFNH-KDPSSKMQRWRLKLEEFDYEIIYRKG 93
W N+ K+P+ K+QRW+++L EFD++I + KG
Sbjct: 507 WLNNLKEPNLKLQRWKVQLNEFDFDITFIKG 537
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ K+PSSK+ R RL LEE+D+ + Y KG
Sbjct: 448 YLFSMKNPSSKLTRMRLDLEEYDFTVEYLKG 478
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 40.3 bits (90), Expect = 0.003
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 16 KDPSSKMQRWRLKLEEFDYEIIYRKG 93
K+P+ K+QRW++KL EFDY I Y G
Sbjct: 575 KEPNMKLQRWKIKLNEFDYHIKYLPG 600
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ ++PSSK+ R RL LEEF++ + Y KG
Sbjct: 80 YLFSMRNPSSKLTRMRLDLEEFEFTVEYLKG 110
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 38.7 bits (86), Expect = 0.010
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 16 KDPSSKMQRWRLKLEEFDYEIIYRKG 93
K+P+SK+ RW+++L E+D++I Y KG
Sbjct: 549 KEPNSKLTRWKIRLSEYDFDIKYIKG 574
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 37.5 bits (83), Expect = 0.022
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 10 NHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
N K+P +K++RWR++L E+ ++I Y KG
Sbjct: 584 NLKEPGAKLERWRVRLSEYQFKIDYIKG 611
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 37.5 bits (83), Expect = 0.022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ +PSSK+ R RL+LEE+D+ + Y +G
Sbjct: 282 YLFSMTNPSSKLTRMRLELEEYDFTVEYLRG 312
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 37.5 bits (83), Expect = 0.022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ +PSSK+ R RL+LEE+D+ + Y +G
Sbjct: 282 YLFSMTNPSSKLTRMRLELEEYDFTVEYLRG 312
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 36.3 bits (80), Expect = 0.051
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 16 KDPSSKMQRWRLKLEEFDYEIIYRKG 93
K+P++K+ RW+ +L E+D++I Y KG
Sbjct: 534 KEPNAKLTRWKFRLAEYDFDIKYVKG 559
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.068
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ +PSSK+ R RL LEE+++ + Y KG
Sbjct: 587 YLFSMVNPSSKLTRMRLDLEEYEFTVEYLKG 617
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 35.5 bits (78), Expect = 0.090
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ +PSSK+ R RL+LEE+++ + Y KG
Sbjct: 693 YLFSMVNPSSKLTRIRLELEEYNFTVEYLKG 723
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 35.5 bits (78), Expect = 0.090
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 1 YWFNHKDPSSKMQRWRLKLEEFDYEIIYRKG 93
Y F+ +PSSK+ R RL+LEE+++ + Y KG
Sbjct: 456 YLFSMVNPSSKLTRIRLELEEYNFTVEYLKG 486
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 25 SSKMQRWRLKLEEFDYEIIYRKG 93
+++++RW+ LEE+DYEI Y+ G
Sbjct: 590 NARIKRWKAYLEEYDYEIFYKPG 612
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/97 (21%), Positives = 44/97 (45%)
Frame = +1
Query: 385 IPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTC 564
IP V+ +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 565 IRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 675
I + Y ++ HA ++ L ++ + R+A+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 32.3 bits (70), Expect = 0.84
Identities = 10/27 (37%), Positives = 22/27 (81%)
Frame = +1
Query: 25 SSKMQRWRLKLEEFDYEIIYRKGISMI 105
++K++RW+ ++EE++ E+IY+ G S +
Sbjct: 521 NAKLKRWKARIEEYNCELIYKPGKSNV 547
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.5 bits (68), Expect = 1.5
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Frame = +1
Query: 289 GVALRNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVR 468
G+ + + + L S R + + + + G I +KYLGV +DR ++F+ H +
Sbjct: 680 GLKIAAHKTEVVLLSSRKSVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYAS 738
Query: 469 DRAAF---ILGRLY-----PMLCSRSKLSLRNKVT-LYKTCI-RPVMTYASVVFAHAART 618
+AA L R+ P L +R L +K T LY I V T + + + A +
Sbjct: 739 KKAAMTAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYLDSARAVS 798
Query: 619 HLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFE 768
+L++I+ F I+ A L + ++LD KYL S E
Sbjct: 799 RTMALRLIRG-FRTISDDAAHALSGI---TPIDLDIKGKYLASEGYTQLE 844
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 29.9 bits (64), Expect = 4.5
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 16 KDPSSKMQRWRLKLEEFDYEIIYRKGISM 102
K+ + ++ RW L+ + +D+EI++R G M
Sbjct: 1096 KELNPRIARWALEFQGYDFEIVHRAGSRM 1124
>DQ503470-1|ABF54966.1| 353|Drosophila melanogaster OLF186-F
protein.
Length = 353
Score = 29.9 bits (64), Expect = 4.5
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 HPRQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRS 596
HP+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 77 HPQHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASS 133
Query: 597 VRSRSPHPLEIPSGYSITILQDSR 668
S+S L P+ S LQ SR
Sbjct: 134 SMSQSGEDLHSPTYLSWRKLQLSR 157
>AY071273-1|AAL48895.1| 351|Drosophila melanogaster RE30427p
protein.
Length = 351
Score = 29.9 bits (64), Expect = 4.5
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 HPRQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRS 596
HP+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 75 HPQHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASS 131
Query: 597 VRSRSPHPLEIPSGYSITILQDSR 668
S+S L P+ S LQ SR
Sbjct: 132 SMSQSGEDLHSPTYLSWRKLQLSR 155
>AF188634-1|AAF01457.1| 351|Drosophila melanogaster F protein
protein.
Length = 351
Score = 29.9 bits (64), Expect = 4.5
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 HPRQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRS 596
HP+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 75 HPQHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASS 131
Query: 597 VRSRSPHPLEIPSGYSITILQDSR 668
S+S L P+ S LQ SR
Sbjct: 132 SMSQSGEDLHSPTYLSWRKLQLSR 155
>AE013599-2579|AAM68473.1| 351|Drosophila melanogaster CG11430-PB,
isoform B protein.
Length = 351
Score = 29.9 bits (64), Expect = 4.5
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 HPRQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRS 596
HP+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 75 HPQHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASS 131
Query: 597 VRSRSPHPLEIPSGYSITILQDSR 668
S+S L P+ S LQ SR
Sbjct: 132 SMSQSGEDLHSPTYLSWRKLQLSR 155
>AE013599-2578|AAF57780.2| 351|Drosophila melanogaster CG11430-PA,
isoform A protein.
Length = 351
Score = 29.9 bits (64), Expect = 4.5
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 HPRQRDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLYTPR-HDVCKRS 596
HP+ + P+ + + + RT++SN+L PP S QN PR H S
Sbjct: 75 HPQHHSNSPTGSGSNSNNSAGFQRTSISNSLLQFPPPPPP---SSQNQAKPRGHHRTASS 131
Query: 597 VRSRSPHPLEIPSGYSITILQDSR 668
S+S L P+ S LQ SR
Sbjct: 132 SMSQSGEDLHSPTYLSWRKLQLSR 155
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 465
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 465
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 465
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 465
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 283 SKGVALRNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRG 435
+ + L N +R+ + SP T FG P+P VS ++ G DRG
Sbjct: 1052 NSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFG-DRG 1101
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 283 SKGVALRNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRG 435
+ + L N +R+ + SP T FG P+P VS ++ G DRG
Sbjct: 1052 NSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFG-DRG 1101
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,243,626
Number of Sequences: 53049
Number of extensions: 843352
Number of successful extensions: 2110
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 2006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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