Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_D03
(847 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 27 0.29
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 27 0.29
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 27 0.29
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 25 0.66
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 24 1.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.7
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 22 8.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 8.2
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 26.6 bits (56), Expect = 0.29
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 110 GEKRIGCAHYKRRAKFVTPCCNKVYICRYCHDENEQHYFNRKTVTELICTECDTRQKVQP 289
GE + G + + C +K Y C + YF K LI T+C K++
Sbjct: 72 GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC---YKLEH 128
Query: 290 ECQNCGVR 313
CG R
Sbjct: 129 PVTGCGER 136
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 26.6 bits (56), Expect = 0.29
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 110 GEKRIGCAHYKRRAKFVTPCCNKVYICRYCHDENEQHYFNRKTVTELICTECDTRQKVQP 289
GE + G + + C +K Y C + YF K LI T+C K++
Sbjct: 77 GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC---YKLEH 133
Query: 290 ECQNCGVR 313
CG R
Sbjct: 134 PVTGCGER 141
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 26.6 bits (56), Expect = 0.29
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 110 GEKRIGCAHYKRRAKFVTPCCNKVYICRYCHDENEQHYFNRKTVTELICTECDTRQKVQP 289
GE + G + + C +K Y C + YF K LI T+C K++
Sbjct: 77 GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC---YKLEH 133
Query: 290 ECQNCGVR 313
CG R
Sbjct: 134 PVTGCGER 141
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 432 SQWKNLSRPPTRHMPHPS 379
SQ+KN+ RH+PH S
Sbjct: 414 SQYKNIREDDARHIPHAS 431
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 290 ECQNCGVRFGKYTCLICNLFDDEDKKQYHCDGC 388
EC C RF + L ++ +K YHC C
Sbjct: 11 ECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHC 43
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 HDENEQHYFNRKTVTELICTECDTRQKV 283
HD+N + + K E+ ECD Q V
Sbjct: 1867 HDQNNSSFNDSKESNEISEAECDRDQLV 1894
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 392 ICRVGGRDRFFHCERCNMCL 451
IC GGR ERCN+ L
Sbjct: 611 ICPDGGRAEINEWERCNLGL 630
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 392 ICRVGGRDRFFHCERCNMCL 451
IC GGR ERCN+ L
Sbjct: 611 ICPDGGRAEINEWERCNLGL 630
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 392 ICRVGGRDRFFHCERCNMCL 451
IC GGR ERCN+ L
Sbjct: 611 ICPDGGRAEINEWERCNLGL 630
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 209 FHHDSNGRCTLCYSMESQTSLAVC 138
+HH+ N CT+ + +T +C
Sbjct: 1679 YHHNVNKHCTIHRTQVKETDDKIC 1702
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.8 bits (44), Expect = 8.2
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +2
Query: 530 IHTSRIPCHIPDCGHLLHRPCFEQ---LLHSGH--YACPTC 637
I T +PC CG RP Q H+G ++C C
Sbjct: 36 IRTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHC 76
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 472 DPLQLNRQAHVAAFTMEE 419
DP+Q+ + H+ FT+E+
Sbjct: 196 DPVQVVKNLHLPRFTLEK 213
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 472 DPLQLNRQAHVAAFTMEE 419
DP+Q+ + H+ FT+E+
Sbjct: 196 DPVQVVKNLHLPRFTLEK 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,422
Number of Sequences: 438
Number of extensions: 4213
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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