Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_C24
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118550-1|AAM49919.1|  689|Drosophila melanogaster LD33046p pro...   131   1e-30
AE014297-2171|AAF55290.1|  689|Drosophila melanogaster CG6814-PA...   131   1e-30
U47619-1|AAA90971.1|  545|Drosophila melanogaster ovary2 protein.     125   6e-29
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    29   9.8  

>AY118550-1|AAM49919.1|  689|Drosophila melanogaster LD33046p
           protein.
          Length = 689

 Score =  131 bits (316), Expect = 1e-30
 Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 10/132 (7%)
 Frame = +3

Query: 261 KSLWTCSVEAAVEYCRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLV 440
           KSLWTC+ E+++EYCR+VWDLFP  K V+F+VSD+ AHI+NTW    QN+ HV+N + +V
Sbjct: 58  KSLWTCACESSIEYCRVVWDLFPGKKHVRFIVSDTAAHIVNTWRPSTQNMAHVMNAMLIV 117

Query: 441 GPVRRG--AGGD---VVGLCAAIEALGEASPEQISRTS---TDR--HFQNRGRIICITSA 590
           G   R      D   + GL AAIEAL E + EQ++  +   TD      N+GR+ICITSA
Sbjct: 118 GVPSRNVPTSSDYSVIHGLRAAIEALAEPTDEQLAAMADFGTDELPRIPNKGRVICITSA 177

Query: 591 RDDDSIRSLXEI 626
           RD+ S++SL +I
Sbjct: 178 RDNTSMKSLEDI 189



 Score = 37.1 bits (82), Expect = 0.028
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +2

Query: 125 LFPVNHKTIFVLDHTPYFGISSE 193
           +F  N KTIFVLDHT YF I+SE
Sbjct: 1   MFERNQKTIFVLDHTRYFSIASE 23


>AE014297-2171|AAF55290.1|  689|Drosophila melanogaster CG6814-PA
           protein.
          Length = 689

 Score =  131 bits (316), Expect = 1e-30
 Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 10/132 (7%)
 Frame = +3

Query: 261 KSLWTCSVEAAVEYCRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLV 440
           KSLWTC+ E+++EYCR+VWDLFP  K V+F+VSD+ AHI+NTW    QN+ HV+N + +V
Sbjct: 58  KSLWTCACESSIEYCRVVWDLFPGKKHVRFIVSDTAAHIVNTWRPSTQNMAHVMNAMLIV 117

Query: 441 GPVRRG--AGGD---VVGLCAAIEALGEASPEQISRTS---TDR--HFQNRGRIICITSA 590
           G   R      D   + GL AAIEAL E + EQ++  +   TD      N+GR+ICITSA
Sbjct: 118 GVPSRNVPTSSDYSVIHGLRAAIEALAEPTDEQLAAMADFGTDELPRIPNKGRVICITSA 177

Query: 591 RDDDSIRSLXEI 626
           RD+ S++SL +I
Sbjct: 178 RDNTSMKSLEDI 189



 Score = 37.1 bits (82), Expect = 0.028
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +2

Query: 125 LFPVNHKTIFVLDHTPYFGISSE 193
           +F  N KTIFVLDHT YF I+SE
Sbjct: 1   MFERNQKTIFVLDHTRYFSIASE 23


>U47619-1|AAA90971.1|  545|Drosophila melanogaster ovary2 protein.
          Length = 545

 Score =  125 bits (302), Expect = 6e-29
 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 10/132 (7%)
 Frame = +3

Query: 261 KSLWTCSVEAAVEYCRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLV 440
           KSLWTC+ E+++EYCR+VWDLFP  K V+F+VSD+ AHI+NTW    QN+ HV+N + +V
Sbjct: 31  KSLWTCACESSIEYCRVVWDLFPGKKHVRFIVSDTAAHIVNTWRPSTQNMAHVMNAMLIV 90

Query: 441 GPVRRG--AGGD---VVGLCAAIEALGE---ASPEQISRTSTDR--HFQNRGRIICITSA 590
           G   R      D   + GL AAIEAL E   +S   ++   TD      N+GR+ICITSA
Sbjct: 91  GVPSRNVPTSSDYSVIHGLRAAIEALAEPPMSSWAAMADFGTDELPRIPNKGRVICITSA 150

Query: 591 RDDDSIRSLXEI 626
           RD+ S++SL +I
Sbjct: 151 RDNTSMKSLEDI 162


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 109 CVKKIFG*LCITHNNVYILNSQFCVQYCTST 17
           C    +   C THN VY   +Q+C QY   T
Sbjct: 497 CSSYCYSYKCSTHNCVYYDQAQYCSQYAGQT 527


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,566,559
Number of Sequences: 53049
Number of extensions: 628579
Number of successful extensions: 1296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)