Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_C21
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104911-1|AAI04912.1| 620|Homo sapiens GLIS family zinc finger... 32 2.3
BC101799-1|AAI01800.1| 620|Homo sapiens GLIS family zinc finger... 32 2.3
AL591720-1|CAH72026.1| 620|Homo sapiens GLIS family zinc finger... 32 2.3
AK093474-1|BAC04178.1| 368|Homo sapiens protein ( Homo sapiens ... 32 2.3
AK090634-1|BAC03494.1| 620|Homo sapiens protein ( Homo sapiens ... 32 2.3
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 32 3.1
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 32 3.1
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 32 3.1
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 32 3.1
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
>BC104911-1|AAI04912.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 535 HPPLRSRLHQPDHQIPEFHTPTTPELNIHFHQSPDAVLEGVRAGV 669
H L S L P H +P H P + H H SP + E R G+
Sbjct: 410 HNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454
>BC101799-1|AAI01800.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 535 HPPLRSRLHQPDHQIPEFHTPTTPELNIHFHQSPDAVLEGVRAGV 669
H L S L P H +P H P + H H SP + E R G+
Sbjct: 410 HNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454
>AL591720-1|CAH72026.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 535 HPPLRSRLHQPDHQIPEFHTPTTPELNIHFHQSPDAVLEGVRAGV 669
H L S L P H +P H P + H H SP + E R G+
Sbjct: 410 HNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454
>AK093474-1|BAC04178.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ36155 fis, clone TESTI2025499, moderately
similar to ZINC FINGER PROTEIN GLI3. ).
Length = 368
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 535 HPPLRSRLHQPDHQIPEFHTPTTPELNIHFHQSPDAVLEGVRAGV 669
H L S L P H +P H P + H H SP + E R G+
Sbjct: 158 HNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 202
>AK090634-1|BAC03494.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ33315 fis, clone BNGH42007037, moderately
similar to ZINC FINGER PROTEIN GLI1 (GLI). ).
Length = 620
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 535 HPPLRSRLHQPDHQIPEFHTPTTPELNIHFHQSPDAVLEGVRAGV 669
H L S L P H +P H P + H H SP + E R G+
Sbjct: 410 HNGLASGLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGL 454
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 31.9 bits (69), Expect = 3.1
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +2
Query: 386 VFPSAPSLKIPVTVDLCWTTGDVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 139 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 193
Query: 566 PIIKSPNSIHQPPQNLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 724
P+ S P N P TP E +P PP S P SA+LTPSSL
Sbjct: 194 PLQLSVEDTTSP--NTKPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 242
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 31.9 bits (69), Expect = 3.1
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +2
Query: 386 VFPSAPSLKIPVTVDLCWTTGDVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 566 PIIKSPNSIHQPPQNLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 724
P+ S P N P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSP--NTKPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 31.9 bits (69), Expect = 3.1
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +2
Query: 386 VFPSAPSLKIPVTVDLCWTTGDVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 566 PIIKSPNSIHQPPQNLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 724
P+ S P N P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSP--NTKPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 31.9 bits (69), Expect = 3.1
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +2
Query: 386 VFPSAPSLKIPVTVDLCWTTGDVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 566 PIIKSPNSIHQPPQNLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 724
P+ S P N P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSP--NTKPCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,873,663
Number of Sequences: 237096
Number of extensions: 2704565
Number of successful extensions: 6950
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6942
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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